Re: [Apbs-users] How can I map electrostatic potential onto solvent accessible area of a certain atom?

[Ran F. <r.f...@bi...>]

Sorry:
http://www.dino3d.org/

Ran Friedman wrote:
> Hi,
>
> A not so difficult option is to use dino:
> sem...@ka...
>
> See their tutorials. The program is able to write a uhbd map.
>
> Hope that helps,
> Ran.
>
> Semin Lee wrote:
>   
>> Hi,
>>
>> I'm trying to map electrostatic potential onto solvent accessible area 
>> of every atom in a protein.
>>
>> Visualizing surface potentials using VMD or PyMol was straightforward, 
>> but I'm not quite sure about how to get actual electrostatic potential 
>> assigned to solvent accessible area of each atom.
>>
>> Is there any easy way to do this?
>>
>> Thanks in advance.
>>
>> Semin
>>
>>
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>
>
>   


-- 
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Ran Friedman
Postdoctoral Fellow
Computational Structural Biology Group (A. Caflisch)
Department of Biochemistry
University of Zurich
Winterthurerstrasse 190
CH-8057 Zurich, Switzerland
Tel. +41-44-6355593
Email: r.f...@bi...
Skype: ran.friedman
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