Re: [AMOS-help] help with minimus.

[David M. <dme...@wu...>]

Hi Andr=E9s,

This list is not particularly active, but usually AMOS's authors do =20
respond. In the summertime with everyone vacationing it may take a =20
bit longer. :)

Dave


> My first question is: has the .fasta file the final sequence? I =20
> mean, there
> are a lot of "sequences" in it (as many sequences as contigs). Is =20
> this file
> the consensus sequence of the assembly?

Without knowing the details of the organism involved and its assembly =20=

it is difficult to answer this question. With many assemblies, =20
particularly those sequenced at low coverage, having lots of contigs =20
is typical.

For your further questions, I'm afraid I cannot help you with those. =20
Perhaps someone else could chime in?

Dave