Re: [AMOS-help] Canot find -lDataStore error

[Michael S. <ms...@um...>]

Hi Sumit,

For some reason the libDataStore wasn't built.

Try rebuilding libDataStore.a in the Contig directory and then rebuilding
the bankViewer directory:

$ cd <AMOS>/src/Contig
$ make
$ cd <AMOS>/src/bankViewer
$ make

Let us know if you have any more problems.

Thanks for your interest,

Michael Schatz



On Tue, Oct 21, 2008 at 4:51 PM, Middha, Sumit <Mid...@ma...>wrote:

>
> Hi,
> I am unable to install amos because of this error:
>
> [m049157@crick4 bankViewer]$ make
> g++  -o hawkeye AssemblyStats.o BufferedLineEdit.o CGraphContig.o
> CGraphEdge.o CGraphView.o CGraphWindow.o ChromoField.o ChromoPicker.o
> ChromoStore.o ConsensusField.o ContigCanvasItem.o ContigPicker.o
> CoverageCanvasItem.o CoverageRectCanvasItem.o DetailWidget.o
> FeatureBrowser.o FeatureCanvasItem.o HistogramWidget.o HistogramWindow.o
> InsertCanvasItem.o InsertField.o InsertPosition.o InsertWidget.o
> InsertWindow.o LaunchPadBase.o LaunchPad.o LibraryPicker.o main.o
> MainWindow.o NChartStats.o NChartWidget.o NChartWindowBase.o NChartWindow.o
> NetworkCom.o OverviewField.o QueryWidget.o RangeScrollBar.o ReadInfo.o
> ReadPicker.o RenderSeq.o ScaffoldPicker.o SelectionWidget.o SplashScreen.o
> TilingField.o TilingFrame.o UIElements.o moc_BufferedLineEdit.o
> moc_CGraphView.o moc_CGraphWindow.o moc_ChromoField.o moc_ChromoPicker.o
> moc_ConsensusField.o moc_DetailWidget.o moc_HistogramWidget.o
> moc_HistogramWindow.o moc_InsertField.o moc_InsertPosition.o
> moc_InsertWidget.o moc_InsertWindow.o moc_LaunchPadBase.o moc_LaunchPad.o
> moc_MainWindow.o moc_NChartWidget.o moc_NChartWindowBase.o
> moc_NChartWindow.o moc_NetworkCom.o moc_OverviewField.o moc_QueryWidget.o
> moc_RangeScrollBar.o moc_ReadInfo.o moc_SelectionWidget.o moc_SplashScreen.o
> moc_TilingField.o moc_TilingFrame.o   -L/usr/lib64/qt-3.3/lib -L../AMOS
> -L../Common -L../Staden/read -L../Contig/ -L../DataStore/ -lDataStore -lAMOS
> -lCommon -lread -lz -lqt-mt -lXext -lX11 -lm -lpthread
>
> /usr/bin/ld: cannot find -lDataStore
> collect2: ld returned 1 exit status
> make: *** [hawkeye] Error 1
> [m049157@crick4 bankViewer]$ uname -a
> Linux crick4.mayo.edu 2.6.18-92.1.10.el5 #1 SMP Tue Aug 5 07:42:41 EDT
> 2008 x86_64 x86_64 x86_64 GNU/Linux
>
> *Sumit Middha* | Informatics Specialist | HSR | 507-284-4706 |
> mid...@ma...
> *Mayo Clinic* | 200 First Street SW | Rochester, MN 55905 | ***
> www.mayoclinic.org*
>
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