Aspergillus databases for FHiTINGS

This project contains alternative databases for FHiTINGS

Brought to you by: nao1

Add a Review

Downloads: 0 This Week

Last Update: 2015-06-30

Browse Code

Add to Preferred Sources

This project contains fasta files of ITS, BenA, and CaM sequences for Aspergillus species, which can be used with FHiTINGS program (https://sourceforge.net/projects/fhitings/).

Citation
Lee, S., Yamamoto, N. (2015). Accuracy of the high-throughput amplicon sequencing to identify species within the genus Aspergillus, Fungal Biology, in press.

Project Activity

See All Activity >

Follow Aspergillus databases for FHiTINGS

Aspergillus databases for FHiTINGS Web Site

Other Useful Business Software

$300 Free Credits to Build on Google Cloud

New customers can spin up VMs, build with AI, and query data at no cost.

Put your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.

Start Free

Rate This Project

User Reviews

Be the first to post a review of Aspergillus databases for FHiTINGS!

Additional Project Details

Registered

2015-06-30

Report inappropriate content

$300 Free Credits to Build on Google Cloud

New customers can spin up VMs, build with AI, and query data at no cost.

Put your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.

Start Free

Recommended Projects

Barcelona Trees
A Guide of the Trees of Barcelona City
Acacia
A generic biodiversity database management system
RDP Classifier
The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments for bacterial and archaeal 16S rRNA sequences, fungal LSU and fungal ITS sequences, with confidence estimates for each assignment. More information and tutorials on how to install, use and retrain RDP Clasifier can be found on at https://github.com/rdpstaff/classifier and John Quensen's blog (https://john-quensen.com/). Citation: 1. Wang Q, Garrity GM, Tiedje JM, Cole JR. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol. 2007 Aug;73(16):5261-7. 2. Wang Q, Cole JR. Updated RDP taxonomy and RDP Classifier for more accurate taxonomic classification. Microbiol Resour Announc. 2024 Apr 11;13(4):e0106323.
ECOLOG
A database management system for ecological field surveys
HyLiTE
Hybrid Lineage Transcriptome Explorer