Is there a utility in ANTs package that can get the list of image values for a given multi-label ROI file?
ImageMath has LabelStats that gives mean values per ROI but I wanted to get the full list of values per ROI.
It has SetOrGetPixel but I don't an easy to get a list of pixel coordinates just using ANTS. I can switch to Matlab and do it but I would like to stick to ANTS and command line if possible.
Is there such a utility? Please let me know!
Thanks so much.
Nagesh
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Hi Nick, Brian,
Is there a utility in ANTs package that can get the list of image values for a given multi-label ROI file?
ImageMath has LabelStats that gives mean values per ROI but I wanted to get the full list of values per ROI.
It has SetOrGetPixel but I don't an easy to get a list of pixel coordinates just using ANTS. I can switch to Matlab and do it but I would like to stick to ANTS and command line if possible.
Is there such a utility? Please let me know!
Thanks so much.
Nagesh
No, for something like that we would got to ANTsR which, I imagine, serves a similar functionality as Matlab does for you.
Got it Nick! Thanks.