Search Results for "disease"
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Showing 94 open source projects for "disease"
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coronavirus
The coronavirus dataset
..., European Centre for Disease Prevention and Control, and Australia Government Department of Health. -
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Synthea Patient Generator
Synthetic Patient Population Simulator
SyntheaTM is an open-source, synthetic patient generator that models the medical history of synthetic patients. Our mission is to provide high-quality, synthetic, realistic but not real, patient data and associated health records covering every aspect of healthcare. The resulting data is free from cost, privacy, and security restrictions, enabling research with Health IT data that is otherwise legally or practically unavailable. The models used to generate synthetic patients are informed by... -
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scArches
Reference mapping for single-cell genomics
Single-cell architecture surgery (scArches) is a package for reference-based analysis of single-cell data. scArches allows your single-cell query data to be analyzed by integrating it into a reference atlas. By mapping your data into an integrated reference you can transfer cell-type annotation from reference to query, identify disease states by mapping to healthy atlas, and advanced applications such as imputing missing data modalities or spatial locations. -
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covid19
Tokyo COVID-19 Task Force website
New coronavirus infectious disease control site. In Tokyo, in order to centrally announce the infection status in Tokyo, we received reports of outbreaks not only in the jurisdiction of the Tokyo Health Center but also in the cities with health centers (Machida City, Hachioji City) and 23 wards, and aggregated these. In Tokyo, we have set seven monitoring items for the new coronavirus infection, with the two pillars of "infection status" and "medical care provision system" in Tokyo. Every week... -
The #1 Embedded Analytics Solution for SaaS Teams.Qrvey’s comprehensive embedded analytics software enables you to design more customizable analytics experiences for your end users.
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PANDORA
Revolutionizing Biomedical Research with Advanced Machine Learning
PANDORA is a machine learning (ML) tool that can be used to integrate various data types, including clinical, transcriptome and microbiome data and find connections in large datasets. PANDORA can be easily installed using Docker, a pre-built version of the software can be pulled from DockerHub. In order to run a test instance of PANDORA, users will first need to prepare their local environment by downloading, installing, and configuring Docker. genular is a community behind SIMON an... -
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Ct.js
Ct.js is a desktop game engine that makes learning programming fun
... documentation right while writing your code. ct.js is based on Pixi.js, works on WebGL and provides great performance in browsers and desktop environments. Modules add new powers, and when ct.js is not enough, you can add any JS code or library. A small stylized adventure with AI-powered sea battles, violent environment, and little puzzle sections. Join the voyage to save a colony from a deadly disease! -
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corona-cli
Track the Coronavirus disease (COVID-19) in the command line
Track the Coronavirus disease (COVID-19) in the command line. Worldwide for all countries, for one country, and the US States. Fast response time (< 100ms).Get worldwide Coronavirus disease (COVID-19) reporting. Active daily reporting of your country's COVID-19 statistics. Get US States data for Coronavirus disease reports across the US. Data includes country, cases, deaths, recovered, active, critical, per million. Charts plot statistics in the form of line charts both regular and logarithmic. -
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HealthFusion
AI Disease Detections System
HealthFusion has identified a critical business problem, which is the lack of accessibility and timely detection of multiple diseases. The traditional approach of detecting diseases is time-consuming, expensive, and not accessible to everyone, especially in remote areas. This problem can lead to delayed diagnosis and treatment, which can have serious consequences for patients. The proposed solution, HealthFusion, is novel and practical as it offers a comprehensive solution to detect... -
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... that are configured when generating the report correspond to the analysis that was actually performed (in other words, avoid modifying the inputs after generating satisfactory results). In addition to an analysis of physical behavior, the app also allows to implement the Daily- and Clinical visit-PROactive Physical Activity in COPD (chronic obstructive pulmonary disease) instruments (D-PPAC and C-PPAC). Please read the user’s guide for details about how the app works.
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Build Securely on Azure with Proven FrameworksMoving to the cloud brings new challenges. How can you manage a larger attack surface while ensuring great network performance? Turn to Fortinet’s Tested Reference Architectures, blueprints for designing and securing cloud environments built by cybersecurity experts. Learn more and explore use cases in this white paper.
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DiseaseExpert
Expertsystem for Disease Diagnostic
Expertsystem for Disease Diagnostic (experimental). -
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KidneyExplorer
Kidney proteomics data explorer enables you to investigate diseases
KidneyExplorer enables you to interactively survey kidney proteomics datasets from different kidney disease models. Here you can download the corresponding SQL database dumps. The original website for the shiny app is: https://kidneyapp.shinyapps.io/kidneyorganoids/ -
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ICD 10 Disease Viewer
Simplifies viewing of ICD 10 codes and descriptions by medical workers
Helps medical personnel search and become familiar with ICD 10 disease codes and descriptions -
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MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
... variability and disease-associations for mitochondrial variants. MToolBox provides also a Variant Call Format file (version 4.0) featuring, for the first time, allele-specific heteroplasmy. Please, check out the most recent updates of the source code with the Github repository of MToolBox: https://github.com/mitoNGS/MToolBox or visit the Web version of MToolBox @ MSeqDR: https://mseqdr.org/mtoolbox.php -
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illness index
illness_index A Computer Program of a Medical Textbook.
... more about. The program has about 600 diseases and 1000 findings. Keywords - disease, health, healthcare, illnesses, illnessindex, illness_index. -
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MSIGNET
A Bayesian approach for disease-associated gene network identification
MSIGNET integrates disease-specific gene expression data and human protein-protein interactions in a Bayesian network, and identifies interactions of genes significantly expressed under the disease condition. -
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Open Source Contact Tracing
Open Source Contact Tracing
... that the standard can be implemented on small devices 9) Allow for the rapid containment of contagious diseases 10) Provide scientists and government useful information about disease progression We are looking to complete the standard, develop reference source code and a very low cost reference hardware platform. This can then be used to build a global system with different countries and vendors working inter operatively to contain and manage pandemics (include COVID19). -
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RWRMTN
Predicting disease-associated miRNAs on a miRNA-target gene network
The misregulations of microRNA have been shown the contribution to diseases. Recently, we have proposed a computational method based on a random walk framework on a microRNA-target gene network to predict disease-associated microRNAs. This was shown superior when compared to existing state-of-the-art network- and machine learning-based methods since it well exploits mutual regulation between miRNAs and their target genes in microRNA-target gene networks. To facilitate the use of this method... -
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OmicsSIMLA
A simulation tool for simulating omics data in disease studies
OmicsSIMLA is a simulation tool for simulating omics data in disease studies. Different sources of omics data, including genomics, methylation, and gene expression data can be simulated in a general population or case-control studies. -
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CorThiZon
Cortical Thickness of brain by Zones
CorThiZon is a Matlab toolbox. MRI 3D T1 images are treated to estimate cortical thickness by zones in native and normalized space. It uses a Laplace-based technique following brain segmentation. Results can be easily reported in Excel files for further statistical analysis. If you use this toolbox, please reference: ‘Early diagnostic of Alzheimer’s disease using cortical thickness: impact of cognitive reserve', Querbes O, Aubry F, Pariente J, Lotterie JA, Démonet JF, Duret V, Puel M... -
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The Disease Ontology has moved to Github. New project page: https://github.com/DiseaseOntology Disease Ontology is a stuctured controlled vocabulary originally based upon and mapped to medical billing codes. The goal of this ontology is to create a comprehensive hierachical controlled vocabulary to represent subsumptive disease relationships.
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MWI spinal cord atlases
Normative atlases for the spinal cord using myelin water imaging
... of abnormalities in individuals with myelin-related disease and damage. A full description of this work can be found in this paper: https://www.ncbi.nlm.nih.gov/pubmed/31407400. -
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W2MHS-DNN
Open Source White Matter Hyperintensities Segmentation Toolbox
Wisconsin White Matter Hyperintensity Segmentation [W2MHS] and Quantification Toolbox is an open source MatLab toolbox designed for detecting and quantifying White Matter Hyperintensities (WMH) in Alzheimer’s and aging related neurological disorders. WMHs arise as bright regions on T2- weighted FLAIR images. They reflect comorbid neural injury or cerebral vascular disease burden. Their precise detection is of interest in Alzheimer’s disease (AD) with regard to its prognosis. Our toolbox... -
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MANTIS R Package
Multi-locus ANTIgenic Simulator R-package for multi-strain pathogens
This repository contains the most updated code version of MANTIS, the Multi-locus ANTIgenic Simulator R-package. MANTIS is developed and maintained by the Evolutionary Ecology of Infectious Disease (EEID) research group at the Department of Zoology, University of Oxford, UK. For theoretical background please refer to 'MANTIS: an R package that simulates multilocus models of pathogen evolution' (https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0598-9 OPEN ACCESS... -
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Nuvarator
A SNV Detection Software Tools Installer Package
... available to researchers interested in evolutionary biology, and hence lays the foundation for predicting disease susceptibility and drug response. It a GUI based software having an automated, easy to use user interface designed in shell script. It is available online at https://sourceforge.net/projects/Nuvarator It is open source and also includes a user manual which aids the user in its installation.