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Showing 3 open source projects for "biodoop"

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    ...See the SeqPig project for a higher-level interface to the file formats supported by Hadoop-BAM: http://seqpig.sourceforge.net See Seal for Hadoop-based read alignment tools, Seal: http://biodoop-seal.sourceforge.net
    2 Reviews
    Downloads: 9 This Week
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  • 2
    Seal

    Seal

    A toolkit for distributed processing of HT sequencing data.

    Seal is a Hadoop-based distributed short read alignment and analysis toolkit. Currently Seal includes tools for: read demultiplexing, read alignment, duplicate read removal, sorting read mappings, and calculating statistics for empirical base quality recalibration. Seal scales, easily handling TB of data.
    Downloads: 0 This Week
    Last Update:
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  • 3
    Bioinformatics applications on Hadoop
    Downloads: 0 This Week
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