Search Results for "data structure" - Page 25
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Showing 1040 open source projects for "data structure"
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Genome Downloader
Downloads genome data from NCBI based on search terms.
GenomeDownloader is a command-line Perl program to download genomic data (using wget) from NCBI. It has been recently (2017-10) completely rewritten to work with the "new" data organization structure at NCBI. Assembly completion level (i.e., Contig, Scaffold, Chromosome or Complete Genome) can also be selected as a criterion for downloading data. Genomic data can be downloaded from all organisms belonging to a certain taxon (e.g., Mammalia or 40674), and downloads can be limited to certain kinds of files (e.g., faa or faa,gbff etc.). ... -
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Learning JavaScript Design Patterns
Repo for my 'Learning JavaScript Design Patterns' book
Learning JavaScript Design Patterns is released under a Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 unported license. It is available for purchase via O'Reilly Media but will remain available for both free online and as a physical (or eBook) purchase for readers wishing to support the project. This edition was updated to ES2015+ syntax in 2021. Design patterns are reusable solutions to commonly occurring problems in software design. They are both exciting and a... -
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Disc Archiver
Easy Data to Disc Backup and Restore
Refilling discs is all you need to do. Once the files are added to the backup list, Disc Archiver will automatically calculate the total discs required, manage the files and process the burning. It can’t be easier than that. -
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sanoWrite
a better xml alternative format for all purposes
moved to GITHUB : https://github.com/sanousy/sanoWrite I have created this language to make my dream come true, and have an editable markup language that can be easily readable (not like xml) and could generate a rich document with format and images and structure ... but starting always from a simple text editor, with a simple language. Also, I've noticed it is a better xml alternative ... this came by incidence ... so, I thought it might have other uses like data interchange in the near future, because it is not verbose, and structured just like xml ... so who knows ... I Need Help too ... ----------------------- I need some help about dynamic html page splitting, and I am planning to add Latex support, and maybe SVG if possible, so, I can have all in one nice document format ... ... -
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Treecster
Yet another framework to read configuration in Java
A tree-like configuration framework suitable for software suites with multiple environments, applications, instances, and other complications. Treecster stands for TREE Configuration System Traversing Environments Readily. -
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Aurora.3
The code for Aurorastation's new base, forked from Baystation12
Aurora.3 is the codebase for AuroraStation, a heavily roleplay-focused Space Station 13 server set aboard the megacorporate starship SCCV Horizon, building upon a Baystation12 fork with rich lore, Discord integration, and MySQL-backed data systems. If you wish to develop for our codebase, please take a look at the guides under .github/guides and the github wiki, as they outline the guidelines for contributing to our codebase, which outline both the process for and the guidelines you must... -
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radius-decoder
Decode Radius packet bytes
This package will decode raw Radius Protocol bytes and fill them into the data structure which can be further used in applications. -
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photoarchive4ever
Organize your picture collections in folders on PC, Mac or disk drive.
This application helps to organize and archive a photo collection on a PC, Mac or external disk drive. It copies and renames the picture files and sorts them into sub-directoris for each day, week, month and/or year. It also supports merging pictures from various sources (cameras, smartphones, drives) into the same diretories. As a result, you get a well organized, easy-to-handle photo collection on your file system (Drive). You may rename folders and files, add or remove pictures... -
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Chinese Poetry
The most comprehensive database of Chinese poetry
This repository is a curated collection of Chinese poems and poets organized into catalogs, metadata, and text representations suitable for research, creative and cultural use. It includes major dynastic corpora, such as Tang and Song poems, as well as biographical and categorization data. Each poem entry is structured with fields like author, dynasty, title, content, and sometimes annotations or alternate versions. Developers and scholars can build tools that query by author, era, keyword, or poetic form using the standardized data structure. Because the project is open, contributors improve metadata, correct text variants, and maintain consistency across classical collections. ... -
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tinyobjloader
Tiny but powerful single file wavefront obj loader
Tiny but powerful single file wavefront obj loader written in C++03. No dependency except for C++ STL. It can parse over 10M polygons with moderate memory and time. tinyobjloader is good for embedding .obj loader to your (global illumination) renderer. We recommend to use master (main) branch. Its v2.0 release candidate. Most features are now nearly robust and stable (The remaining task for release v2.0 is polishing C++ and Python API). -
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autoFRK
Automatic Fixed Rank Kriging
...For data with missing values, the ML estimates are obtained using the expectation-maximization algorithm. Apart from the number of basis functions, there are no other tuning parameters, making the method fully automatic. Users can also include a stationary structure in the spatial covariance, which utilizes 'LatticeKrig' package. -
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Angular-Meteor Compilers
Angular and Meteor, the perfect stack
Angular-Meteor is completely Open Source. It brings the responsive power of Angular to the powerful and flexible Meteor stack. Deploy wherever you want. Sync data in realtime across your own server, DB and clients instantly. Use your existing Angular knowledge to create your server. Remove boilerplate by calling Angular Services from the server directly on your client. Don't choose just one solution. We created this library so that you can comfortably use both AngularJS and Meteor. You can... -
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redux-immutable
redux-immutable is used to create an equivalent function of Redux
redux-immutable is a utility library designed to integrate Immutable.js data structures seamlessly into Redux state management workflows. It modifies the standard behavior of Redux’s combineReducers function so that the global state is represented as an immutable data structure rather than a plain JavaScript object. This approach helps enforce immutability at a structural level, reducing bugs caused by accidental state mutations and improving predictability in application behavior. ... -
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JavaCá&Lá
A java middleware for HPC and IoT
...An API for internal control enables collecting several times and memory usage of tasks submitted to the JCL cluster. Finally, a distributed map implementation adopts de Java Map interface, a common data structure for Java developers. The JCL map enables distributed storage with low refactoring. -
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aframe-react
Build virtual reality experiences with A-Frame and React
Build virtual reality experiences with A-Frame and React. A-Frame is a web framework for building virtual reality experiences. Since A-Frame is built on top of the DOM, web libraries such as React, Vue.js, Angular, Ember.js, d3.js are able to sit cleanly on top of A-Frame. I recommend using vanilla A-Frame and aframe-state-component with static templating over aframe-react. React wastes a lot of cycles and incurs a lot of memory garbage. aframe-react is often abused where it is too easy to... -
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VeriSiMPL
Verification via biSimulations of Max-Plus-Linear models
This toolbox is used to generate finite abstractions of autonomous Max-Plus-Linear (MPL) systems over R^n. Abstractions are characterized as finite-state Labeled Transition Systems (LTS). The LTS finite abstractions are shown to either simulate or to bisimulate the original MPL system. LTS models are to be verified against given specifications expressed as formulae in Linear Temporal Logic (LTL) and Computation Tree Logic (CTL). The toolbox intends to leverage the NuSMV model checker. Models... -
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epi-ACE is a tool for examining the hierarchical data structure of small epidemiological data sets. It provides facilities to scale attributes, import data and draw 3D lattices. Its mathematical foundations are in Formal Concept Analysis.
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SummitDB
In-memory NoSQL database with ACID transactions, Raft consensus, etc.
...SummitDB provides one key space that is a large B-tree. An ordered key space allows for stable paging through keys using the KEYS command. Redis uses an unordered dictionary structure and provides a specialized SCAN command for iterating through keys. -
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Fondement Michtam
Few useful tools that will be liberally used in all my projects.
...By convention, any new created object is stacked on it. - The pStack used for stocking (short lived) results of intermediate computation. - Macros for stacking data, Marking and Releasing. If I am not mistaken, this would be the Pascal way of doing things. - Macro for switching to a local stack when need arise. And that's it. Th -
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FtpDrive
Emulates logical drive with mounted FTP/FTPS servers
...Completely implements read operations for FTP files Partially implements write operations for FTP files (see 'How to use') Can intercept opening ftp:// links from other applications - simple press Ctrl key while opening ftp:// path and it will be opened on FtpDrive Compatible with many applications, except those, that uses own drivers to access files Caches directories structure and read files data This is old project, just decided to share its sources -
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MOGEN
The software for modeling the 3D structure of a genome using Hi-C data
The software builds 3D models of chromosomes or genome given chromosomal contacts data such as Hi-C, TCC, 5C. MOGEN was tested on simulated datasets. Using real Hi-C data of a human cell line, MOGEN built models that are consistent with knowledge about the genome of the cell line. Detail on how to use it: https://github.com/BDM-Lab/MOGEN It is published in Bioinformatics: http://bioinformatics.oxfordjournals.org/content/32/9/1286 Bioinformatics, Data Mining, Machine Learning (BDM)... -
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Buckets
A complete, fully tested and documented data structure library
A complete fully tested and documented data structure library written in pure JavaScript. Buckets also includes several functions for manipulating arrays. A bag is a special kind of set in which members are allowed to appear more than once. Binary search trees keep their elements in sorted order, so that lookup and other operations can use the principle of binary search. Dictionaries map keys to values, each key can map to at most one value. -
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ZPar statistical parser. Universal language support (depending on the availability of training data), with language-specific features for Chinese and English. Currently support word segmentation, POS tagging, dependency and phrase-structure parsing.
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RTToolbox
Library to support quantitative analysis of radiotherapy data
Moved to: http://github.com/MIC-DKFZ/RTTB RTToolbox is a software library, developed at the DKFZ to support quantitative analysis of treatment outcome for radiotherapy. The RTToolbox was designed following object-oriented design principles and was implemented in the language C++. It supports the import of radiotherapy data (e.g. dose distributions and structure sets) from DICOM-RT format and other standard image processing formats by using a bridge to ITK. The RTToolbox supports the full range of radiotherapy evaluation. Tools such as DVH calculation, arithmetic operations on dose distributions and structure relationship analysis are provided as a basis for further calculations. ... -
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Algorithms in Python
Data Structures and Algorithms in Python
Algorithms in Python is a collection of algorithm and data structure implementations (primarily in Python) meant to serve as both learning material and reference code for engineers. It includes code for graph algorithms, heap data structures, stacks, queues, and more — each implemented cleanly so learners can trace logic and adapt for their problems. The repository is particularly useful for people preparing for competitive programming, job interviews, or building a foundational understanding of algorithmic patterns. ...
