JetSet is a (meta) tool that lets your quickly create model tranformator tools for instances of a given source meta model. For XML to XML transformations you can also specify a target XML schema and JetSet makes sure that your output conforms to this.
Quantum Mechanical Toolkit And 3D Viewer for C++. Allows Data Visualisation via Images, Surfaces and Volume plots using OpenGL, as well as rapid development Quantum Mechanical Simulations. Uses the Blitz++, VTK Visualisation and Qt Libraries.
Runes is a plugin-based framework that reverses the way of thinking about dataprocessing: specify data accesses, and Runes will automatically choose an efficient representation for the data and execute the plugins to integrate it from different sources.
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cy.prus is a cross platform simulation environment for medical cybernetics and systems biology.
Its purpose is to provide both a facility for simulating life and a GUI for easily constructing biological information processing structures based on XML.