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FileRunner is a two pane file manager for Unix and Unix like systems. It is simple and efficient and has a built-in FTP and SFTP client. It also does a reasonable (and improving) job on Windows systems. New and improved from a FileRunner of long ago.

...Mounting support for file systems defined in fstab, and integration with mount daemons that manage a dedicated media directory is also included. XFile is easily configurable and customizable with X resources, and has no dependencies, save for X and Motif. Documentation and more on the project homepage: https://fastestcode.org/xfile.html

antigift could be used for encryption files & folders on USB-flash or HDD partition. Works on Linux (including Android), Windows, Mac OS X, FreeBSD, DragonFly BSD and other on OSes. Do not required installation. Include WIPE tool for wiping free space and tool for recovery forgotten key. See documentation at http://sourceforge.net/p/antigift/wiki/Home/ antigift простой и кросс-платформенный инструмент для шифрования файлов и папок(с ccrypt в качестве основы) Подробности см. на страничке с русской документацией http://sourceforge.net/p/antigift/wiki/rus/

Nixstaller is an Open Source project with the goal to create user friendly and flexible installers that work on various UNIX like systems. Some of its features are: small size overhead, large compatibility, Lua scripting and few dependencies.