Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
MAGeCK2 is here: https://github.com/davidliwei/mageck2
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology.
For instructions and documentations, please refer to the wiki page.
MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at...
A slick interface to see various scale analysis algorithms in action.
The Shape Visualizer is intented to be an exploratory/educational tool making it quick and easy to see how various mathematical methods perform in analysing and selecting the various patterns present on an image.
The main website is built as a wiki gathering info and examples on the various implemented algorithms.
The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis.
Feel free to contribute code or wiki content !