Showing 16 open source projects for "mii-tool"

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  • 1
    Statistics

    Statistics

    Detects usage of unsafe Rust in a Rust crate and its dependencies

    A tool that lists statistics related to the usage of unsafe Rust code in a Rust crate and all its dependencies.
    Downloads: 0 This Week
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  • 2
    STK

    STK

    a Small (Matlab/Octave) Toolbox for Kriging

    The STK is a (not so) Small Toolbox for Kriging. Its primary focus in on the interpolation / regression technique known as kriging, which is very closely related to Splines and Radial Basis Functions, and can be interpreted as a non-parametric Bayesian method using a Gaussian Process (GP) prior. The STK also provides tools for the sequential and non-sequential design of experiments. Even though it is, currently, mostly geared towards the Design and Analysis of Computer Experiments (DACE),...
    Downloads: 3 This Week
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  • 3

    MAGeCK

    Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout

    MAGeCK2 is here: https://github.com/davidliwei/mageck2 Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. ...
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    Downloads: 110 This Week
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  • 4

    ADaMSoft

    Open Source and data mining software

    ADaMSoft is a free and Open Source Data Mining software developed in Java. It contains data management methods and it can create ready to use reports. It can read data from several sources and it can write the results in different formats.
    Downloads: 1 This Week
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  • 5
    PlanetPack

    PlanetPack

    Radial-velocity & transits analysis tool for exoplanets

    PlanetPack is a software tool developed to facilitate the radial-velocity time-series analysis for the goal of exoplanets detection, characterization, and basic dynamical simulations. The description of the main theoretic concepts, statistical methods and algorithms that PlanetPack implements, is given in the following refereed papers: R.V. Baluev 2013, Astronomy & Computing, V. 2, P. 18 (initial release); R.V.
    Downloads: 1 This Week
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  • 6
    zCharter
    Charting tools, backtesting tools, and data visualization tools for the most popular cryptocurrencies.
    Downloads: 0 This Week
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  • 7

    TimescapeGlobal

    a space-time interpolation geostatistical tool

    This software is a time-aware geostatistical tool. Including time variability adds further issues to the already complicated field of geostatistical interpolation. On the other hand, most of the distributions of variables used in Earth and environmental sciences show patterns of change over time, not only in space. This tool is a free, open-source software, based on a generalization of the Inverse Distance Weighted algorithm.
    Downloads: 0 This Week
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  • 8

    CalcoloCombinatorio-Java

    Un semplice programma in Java per il calcolo combinatorio

    Un piccolo tool in java per effettuare calcoli combinatori come: -Disposizioni -Permutazioni -Combinazioni Calcolo Combinatorio Java
    Downloads: 0 This Week
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  • 9

    Immutable Sparse Wave Trees (WaveTree)

    Realtime bigdata tool for bit strings up to 2^63 based on AVL forest

    Realtime bigdata tool at the bit level based on immutable AVL forest which can be run in memory or, in future versions, as a merkle forest like a blockchain. Main object is a sparse bit string (Bits) that efficiently scales up to 2^63 bits normally compressed as forest has duplicated substrings. Bits objects support reading bit, byte, short, int, or long (Java primitives) at any bit index in 64 bit range.
    Downloads: 0 This Week
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  • 10
    coalescent

    coalescent

    Software tool for Research in Computational Population Genetics

    Development of exact and approximate methods (Importance Sampling and MCMC based) for computing likelihoods under the standard population genetic models of mutation,migration & recombination. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/COALESCENT
    Downloads: 0 This Week
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  • 11
    TOPS_CeMM

    TOPS_CeMM

    User Friendly Data Analysis Tool for Interaction Data

    TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here.
    Downloads: 0 This Week
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  • 12

    StochDecomp

    User Manual describing theory behind the package, installation instruc

    ...This is the first computational tool that allows to decompose noise into contributions resulting from individual reactions.
    Downloads: 0 This Week
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  • 13
    DeDAY

    DeDAY

    MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.

    DeDAY (Demography Data Analyses) is a tool of analyzing demography data. It supports Gompertz, Weibull and Logistic distributions. DeDay also supports mixed mortality models based on these distribution such as the Gompertz-Makeham distribution. Distributions such as Gompertz describes only age-dependent mortality, which increases over time. Mixed mortality models, such as in Gompertz-Makeham distribution, consider a more general case where mortality is consist of both age-dependent and in-dependent mortality. ...
    Downloads: 0 This Week
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  • 14

    DyMMM

    Dynamic Multispecies Metabolic Modeling framework

    The Dynamic Multispecies Metabolic Modeling (DyMMM [dĭm]) framework is a mathematical modeling tool that integrates multiple constraint-based metabolic models into a single dynamic community metabolic model. The DyMMM framework was formerly known as the DMMM framework. Please use the following citation for bibliographical purposes: Zhuang, K., Izallalen, M., Mouser, P., Richter, H., Risso, C., Mahadevan, R., & Lovley, D. R. (2011).
    Downloads: 0 This Week
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  • 15
    ShiVaSmiles

    ShiVaSmiles

    A slick interface to see various scale analysis algorithms in action.

    The Shape Visualizer is intented to be an exploratory/educational tool making it quick and easy to see how various mathematical methods perform in analysing and selecting the various patterns present on an image. The main website is built as a wiki gathering info and examples on the various implemented algorithms. The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis.
    Downloads: 0 This Week
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  • 16
    Stand-alone software tool for the interactive CE analysis of microarray data. The software is a user-friendly and allows on-the-fly study of CE
    Downloads: 0 This Week
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