Showing 91 open source projects for "scientific plotting software"

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  • 1
    TOPS_CeMM

    TOPS_CeMM

    User Friendly Data Analysis Tool for Interaction Data

    TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here.
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  • 2
    IterInt is a numerical integration package that implements iterated numerical integration methods. Iterated methods can be used to compute low dimensional (less than ten, for example) integration problems to get very accurate results.
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  • 3

    GENIE (GEne-geNe IntEraction)

    GPU based Parallel Gene-Gene Interaction Analysis

    ...Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. ...
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  • 4
    Statistics modules in Perl Data Language, with a quick-start guide for non-PDL people. They make the PDL shell work like R, but with PDL threading (fast automatic iteration) of procedures including t-test, linear regression, and k-means clustering.
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  • 5
    EnvStats

    EnvStats

    An R Package for Environmental Statistics

    EnvStats is an R package for environmental statistics. It is the open-source successor to the commercial module for S-Plus© called "EnvironmentalStats for S-Plus", which was first released in April, 1997. The EnvStats package, along with the R software environment, provides comprehensive and powerful software for environmental data analysis. EnvStats brings the major environmental statistical methods found in the literature and regulatory guidance documents into one statistical package,...
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  • 6
    Please participate in the SURVEY on rgedit's future: https://www.surveymonkey.com/s/VNMMJMJ your answers are much appreciated! Gedit (Gnome editor, www.gedit.org) plug-in allowing it to become an easy-to-use and yet light-weight IDE for the statistical programming environment, R (www.r-project.org).
    Downloads: 0 This Week
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  • 7
    Myrtle

    Myrtle

    A simple programmable spreadsheet for learning statistics.

    Myrtle is a simple programmable spreadsheet and statistical analysis software specifically designed for learning statistics. It provides the standard spreadsheet functionality one would expect like multiple tabbed sheets, relative and absolute row and column referencing in formulas, and a large catalog of built-in functions. Functions specific to logic and computer science, mathematics, probability, and statistics are available. Student's can easily create, customize, and update plots and...
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  • 8

    r2web

    Software for medical statistics based on R

    The open source software R enables a large number of statistical analyzes. The software R2web allows to use those R functions that are useful for medical students, with a web interface that facilitates the work of the student (it replaces line commands in R with checkboxes, radio buttons, etc. ). Un logiciel en ligne pour les statistiques pour la médecine, basé sur R. Le logiciel open source R permet de faire un grand nombre d'analyses statistiques. Avec R2web, seules les fonctions R...
    Downloads: 0 This Week
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  • 9
    genomemap
    A software framework to build maps for Neurospora crassa genome based on probabilistic models of meiotic recombination. A netbeans platform application is built to incorporate the computations. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/GENOMEMAP
    Downloads: 0 This Week
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  • 10

    libfgen

    Library for optimization using a genetic algorithm or particle swarms

    libfgen is a library that implements an efficient and customizable genetic algorithm (GA). It also provides particle swarm optimization (PSO) functionality and an interface for real-valued function minimization or model fitting. It is written in C, but can also be compiled with a C++ compiler. Both Linux and Windows are supported.
    Downloads: 0 This Week
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  • 11
    R packages supporting parallel computing.
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  • 12

    Gradesystem

    Gradesystem

    C programmed text-based software. Inputs : -Name of a course -Number of students -The 100% value of a mark -All the marks Then it estimates the Standard Deviation and grades, then assigns the marks to the grades inside a text.
    Downloads: 0 This Week
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  • 13

    Math Simulator

    A simulation software for numerical techniques.

    Math Simulator is a java-based application which simulates various mathematical techniques.It is extremely useful for the Engineering students and for professionals. Most importantly, unlike most others Math Simulator is an Application rather than a java - library. So, user is not required to have any computer background. A Unique feature of Math Simulator is that it allows you to save queries for later reference. Hence you can save the problems along with their results.
    Downloads: 0 This Week
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  • 14
    C++ Airline Travel Market Simulator
    That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
    Downloads: 0 This Week
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  • 15
    This is a Matlab software package for single molecule FRET data analysis.
    Downloads: 2 This Week
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  • 16
    M-S Lab

    M-S Lab

    Math-Statistics LABoratory

    M-S Lab is a free software for statistical computing and graphics. M-S Lab is available in two distributions: The built-in language support is implemented in "Own" version. And for users who like to code in Lua scripting language we made a "Lua" version. Both versions are available for free download in the Downloads page.
    Downloads: 0 This Week
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  • 17
    A statistics extension for Open Office with a feel of SPSS. Primarily meant for students of social sciences as well as other in a need of easy-to-use statistics software.
    Downloads: 0 This Week
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  • 18
    mlpy

    mlpy

    Machine Learning Python

    mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL. mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3. mlpy is available both for Python >=2.6 and Python 3.X.
    Downloads: 1 This Week
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  • 19
    Nen

    Nen

    neural network implementation in java

    3-layer neural network for regression and classification with sigmoid activation function and command line interface similar to LibSVM. Quick Start: "java -jar nen.jar"
    Downloads: 0 This Week
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  • 20

    HPCall

    Improved base-calling for homopolymer-sensitive next-gen data.

    The current software contains the implementation for the 454 pyrosequencing platform.
    Downloads: 0 This Week
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  • 21

    knowceans

    Utility classes from maps to search engine to random samplers

    Collection of several multi-purpose Java libraries. --- knowceans-tools = collection of Java utility classes. --- Highlights: --- org.knowceans.util: IndexQuickSort, TableList: apply order of one array/list to others +++ Vectors, ArrayUtils: array convenience +++ RandomSamplers, CokusRandom, ArmSampler, Densities: random sampling and distributions +++ Arguments: command line parser +++ StopWatch, Which, ExternalProcess: runtime stuff +++ ParallelFor: OpenMP workalike +++ PatternString,...
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  • 22
    statistics software
    Downloads: 0 This Week
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  • 23
    This software computes likelihoods for infinitely-many-sites sequence data under multiple merger coalescents. The likelihood can be computed exactly or approximated via importance sampling.
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  • 24
    The final build of this software now is distributed in R, embedded in "RedeR': an R/Bioconductor package for hierarchical and nested network analysis... more about RedeR: http://bioconductor.org/packages/2.9/bioc/html/RedeR.html
    Downloads: 0 This Week
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  • 25
    T3S Tool

    T3S Tool

    Learning Stochastic Discrete Event Systems

    Stochastic discrete event system analysis and verification are essential in order to ensure reliability in such systems. However, models that cannot be constructed with an hand-made process need to be learned. Thus, the SDES toolbox proposes an automated solution that is embedded in Matlab to learning and analisis generalized semi-Markov processes.
    Downloads: 0 This Week
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