Showing 53 open source projects for "command line tools"

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  • 1

    Hrothgar Parallel LM/MCMC Minimizer

    A versatile MCMC and downhill optimization engine

    Hrothgar is a parallel minimizer and Markov Chain Monte Carlo generator by Andisheh Mahdavi of San Francisco State University. It has been used to solve optimization problems in astrophysics (galaxy cluster mass profiles) as well as in experimental particle physics (hadronic tau decays). It is probably adaptable enough to be applied to your merit function if you can write it in C.
    Downloads: 0 This Week
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  • 2
    KeplerDB

    KeplerDB

    Timeseries databases management system

    KeplerDB is a temporal database to store time/value entries where the type of value could be integer, float/double, boolean and string. KeplerDB is dedicated to be scalable and to create clusters of server allowing the user to analyse and store massing amount of data to monitor systems like computers, clusters, building and captors or financial systems like markets and accounts. The user can use KeplerDB to make data analysis on enormous amount of data (statistics and modelling).
    Downloads: 0 This Week
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  • 3

    datadensityplot

    Creates a data density plot of a 2 dimensional data distribution.

    Shows the data density of a 2 dimensional distribution. The problem of showing data density visually is not mathematically well defined, and there are several methods. The program uses sum of reciprocal squared distance to calculate density at each point, with a smear factor to prevent points going to infinity. The smear factor also controls the amount of clustering. There are several options for colour output. Input is via a csv (comma-separated values) file. Now there's a nice GUI...
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  • 4
    Soothsayer

    Soothsayer

    Capacity exhaustion prediction from RRD files

    Predict if storage utilised will reach capacity within defined period (maximum 5 years), using recent historical data contained within RRD files (maximum -1 year). Produces HTML (or partial HTML) and, more importanly, a PNG RRD Graph showing the prediction and, should the capacity be reached, an annotation indicating when. Optionally email out exception notices.
    Downloads: 0 This Week
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  • 5
    fesslix

    fesslix

    Stochastic Analysis

    A brief summary of the main features of Fesslix: - Perform non-intrusive reliability analysis or Bayesian updating either --- by running commands on the command line or --- by means of an Octave interface or --- by means of a Python interface - Flexible input language for writing Fesslix parameter files --- Control flow statements (e.g. if, for, while) --- Most parameters can be defined as functions - Working with response surfaces - Linear finite element analysis using truss, beam and plane stress/strain elements - Spectral Stochastic Finite Elements - Bayesian networks This is the download page for Windows executables of Fesslix.
    Downloads: 0 This Week
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  • 6
    Statistics modules in Perl Data Language, with a quick-start guide for non-PDL people. They make the PDL shell work like R, but with PDL threading (fast automatic iteration) of procedures including t-test, linear regression, and k-means clustering.
    Downloads: 1 This Week
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  • 7
    A collection of small utilities with a connection to cryptography and cryptanalysis. Written for efficiency and a small memory footprint.
    Downloads: 0 This Week
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  • 8

    abc-sde

    approximate Bayesian computation for stochastic differential equations

    A MATLAB toolbox for approximate Bayesian computation (ABC) in stochastic differential equation models. It performs approximate Bayesian computation for stochastic models having latent dynamics defined by stochastic differential equations (SDEs) and not limited to the "state-space" modelling framework. Both one- and multi-dimensional SDE systems are supported and partially observed systems are easily accommodated. Variance components for the "measurement error" affecting the...
    Downloads: 0 This Week
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  • 9

    libfgen

    Library for optimization using a genetic algorithm or particle swarms

    libfgen is a library that implements an efficient and customizable genetic algorithm (GA). It also provides particle swarm optimization (PSO) functionality and an interface for real-valued function minimization or model fitting. It is written in C, but can also be compiled with a C++ compiler. Both Linux and Windows are supported.
    Downloads: 22 This Week
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  • 10
    R packages supporting parallel computing.
    Downloads: 0 This Week
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  • 11
    Command line fibonacci series calculation program.
    Downloads: 0 This Week
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  • 12
    RVASSOC is a simple program for performing various tests for association between genotypes and disease status using sequence variants from unrelated cases and controls. It was designed to accommodate both rare variants and missing genotypes.
    Downloads: 0 This Week
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  • 13
    C++ Airline Travel Market Simulator
    That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
    Downloads: 0 This Week
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  • 14
    Nen

    Nen

    neural network implementation in java

    3-layer neural network for regression and classification with sigmoid activation function and command line interface similar to LibSVM. Quick Start: "java -jar nen.jar"
    Downloads: 0 This Week
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  • 15

    knowceans

    Utility classes from maps to search engine to random samplers

    Collection of several multi-purpose Java libraries. --- knowceans-tools = collection of Java utility classes. --- Highlights: --- org.knowceans.util: IndexQuickSort, TableList: apply order of one array/list to others +++ Vectors, ArrayUtils: array convenience +++ RandomSamplers, CokusRandom, ArmSampler, Densities: random sampling and distributions +++ Arguments: command line parser +++ StopWatch, Which, ExternalProcess: runtime stuff +++ ParallelFor: OpenMP workalike +++ PatternString, NamedGroupRegex: regex convenience --- org.knowceans.corpus: CorpusSearcher: full-text search engine +++ LabelNumCorpus: svmlight corpus storage and filtering +++ NIPS corpus with text, authors, labels and citations --- org.knowceans.map: InvertibleHashMultiMap, BijectiveHashMap: implement n:m and 1:1 relations. --- Other libs: knowceans-arms = port of the Adaptive Rejection Metropolis Sampler (ARMS) for arbitrary distributions +++ lda-j = port of lda-c, implementing Latent Dirichlet Allocation (LDA)
    Downloads: 0 This Week
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  • 16
    This software computes likelihoods for infinitely-many-sites sequence data under multiple merger coalescents. The likelihood can be computed exactly or approximated via importance sampling.
    Downloads: 0 This Week
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  • 17
    A collection of compact, powerful programs and functions, written in C, for the analysis and transformation of data. No object or structure dependencies, no fancy interfaces - just good tools.
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  • 18
    This project hosts tools used for analysis of Gaussian Mixture Distributions (GMDs) which are used for statistical signal processing. The tools are libraries for implementing GMD operations and programs used to analyze properties of GMDs.
    Downloads: 0 This Week
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  • 19
    clusterCons
    An R package implementation of a consensus clustering methodology. This package allows users to perform re-sampling statistics based clustering using multiple clustering algorithms to assess the robustness of both clusters and members of clusters.
    Downloads: 0 This Week
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  • 20
    Worst Cases is a python script that enables calculations on worst case objects. Like a calculator operating on worst cases (e.g. [1,2,3]) rather than on real numbers (2.35) WARNING: This program is released as is, and has never been extensively teste
    Downloads: 0 This Week
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  • 21
    LCMStats - An R package
    An R package for detailed inspection and analysis of LCMS data. An R package developed by Sukhdeep Singh at Department of Surgery and Cancer, Imperial College London,UK.
    Downloads: 0 This Week
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  • 22
    Stand-alone software tool for the interactive CE analysis of microarray data. The software is a user-friendly and allows on-the-fly study of CE
    Downloads: 0 This Week
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  • 23
    Software made available by the Residual Analysis blog, primarily having to do with anthropogenic global warming, e.g. GHCN Processor.
    Downloads: 0 This Week
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  • 24
    Provides an API, which enables the Matlab or Octave user (and developer) to incorporate Space Weather data and metadata resources from the Space Physics Interactive Data Resource (SPIDR) directly into an Matlab/Octave application. Examples included.
    Downloads: 0 This Week
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  • 25
    Provides an API, which enables the Interactive Data Language (IDL) user (and developer) to incorporate Space Weather data and metadata resources from the Space Physics Interactive Data Resource (SPIDR) directly into an IDL application. Examples included.
    Downloads: 1 This Week
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