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Uranie is CEA's uncertainty analysis platform, based on ROOT
Uranie is a sensitivity and uncertainty analysis plateform based on the ROOT framework (http://root.cern.ch) . It is developed at CEA, the French Atomic Energy Commission (http://www.cea.fr).
It provides various tools for:
- data analysis
- sampling
- statistical modeling
- optimisation
- sensitivity analysis
- uncertainty analysis
- running code on high performance computers
- etc.
Thanks to ROOT, it is easily scriptable in CINT (c++ like syntax) and Python.
Is is available...
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology.
For instructions and documentations, please refer to the wiki page.
MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. We thank the support...
Software for speech research. It includes programs and libraries for signal processing, along with general purpose scientific libraries. Most of the code is in Python, with C/C++ supporting code. Also, contains code releases corresponding to publishe
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL.
mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3.
mlpy is available both for Python >=2.6 and Python 3.X.
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