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Uranie is CEA's uncertainty analysis platform, based on ROOT
...It is developed at CEA, the French Atomic Energy Commission (http://www.cea.fr).
It provides various tools for:
- data analysis
- sampling
- statistical modeling
- optimisation
- sensitivity analysis
- uncertainty analysis
- running code on high performance computers
- etc.
Thanks to ROOT, it is easily scriptable in CINT (c++ like syntax) and Python.
Is is available both for Unix and Windows platforms (a dedicated platform archive is available on request).
Note : if you have downloaded version 3.12 before the 8th of february, a patch exists for a minor bug on TOutputFileKey file, don't hesitate to ask us.
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
MAGeCK2 is here: https://github.com/davidliwei/mageck2
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology.
For instructions and documentations, please refer to the wiki page.
MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at...
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL.
mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3.
mlpy is available both for Python >=2.6 and Python 3.X.