Search Results for "clinical lab software"
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Showing 14 open source projects for "clinical lab software"
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AutoKeras
AutoML library for deep learning
AutoKeras: An AutoML system based on Keras. It is developed by DATA Lab at Texas A&M University. The goal of AutoKeras is to make machine learning accessible to everyone. AutoKeras only support Python 3. If you followed previous steps to use virtualenv to install tensorflow, you can just activate the virtualenv. Currently, AutoKeras is only compatible with Python >= 3.7 and TensorFlow >= 2.8.0. AutoKeras supports several tasks with extremely simple interface. AutoKeras would search for the... -
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Qiskit
Qiskit is an open-source SDK for working with quantum computers
Qiskit [kiss-kit] is an open-source SDK for working with quantum computers at the level of pulses, circuits, and application modules. When you are looking to start Qiskit, you have two options. You can start Qiskit locally, which is much more secure and private, or you get started with Jupyter Notebooks hosted in IBM Quantum Lab. Qiskit includes a comprehensive set of quantum gates and a variety of pre-built circuits so users at all levels can use Qiskit for research and application... -
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LangExtract
A Python library for extracting structured information
LangExtract is a Python library developed by Google that leverages large language models (LLMs) to extract structured information from unstructured text—such as clinical notes, research papers, or literary works—based on user-defined instructions. It is designed to transform free-form text into reliable, schema-constrained data while maintaining traceability back to the source material. Each extracted entity is precisely grounded in its original context, allowing visual inspection and... -
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aws-devops-zero-to-hero
AWS zero to hero repo for devops engineers to learn AWS in 30 Days
aws-devops-zero-to-hero is a 30-day AWS learning roadmap aimed squarely at DevOps engineers who want both conceptual understanding and hands-on projects. The README is structured as a day-by-day syllabus, starting with “Day 1: Introduction to AWS” and moving through IAM, EC2, VPC networking, security, DNS (Route 53), storage (S3), and many other core services. Each day mixes explanation with at least one concrete project or lab, such as deploying applications on EC2, designing secure VPCs,... -
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SecurePose
Automated Face Blurring, Kinematics Extraction and Leg dystonia Dx
SecurePose, an open-source software, automates face blurring, human movement kinematics extraction and leg Dystonia diagnosis. The software provides clinical-grade face blurring with minimal manual effort. It was validated on videos recorded in clinical settings. The tool employs pose estimation to track and uniquely identify individuals, recognize patients, perform effective face blurring, and identify leg dystonia. -
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fastMRI
A large open dataset + tools to speed up MRI scans using ML
fastMRI is a large-scale collaborative research project by Facebook AI Research (FAIR) and NYU Langone Health that explores how deep learning can accelerate magnetic resonance imaging (MRI) acquisition without compromising image quality. By enabling reconstruction of high-fidelity MR images from significantly fewer measurements, fastMRI aims to make MRI scanning faster, cheaper, and more accessible in clinical settings. The repository provides an open-source PyTorch framework with data... -
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DeepMind Research
Implementations and code to accompany DeepMind publications
This repository collects reference implementations and illustrative code accompanying a wide range of DeepMind publications, making it easier for the research community to reproduce results, inspect algorithms, and build on prior work. The top level organizes many paper-specific directories across domains such as deep reinforcement learning, self-supervised vision, generative modeling, scientific ML, and program synthesis—for example BYOL, Perceiver/Perceiver IO, Enformer for genomics,... -
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Wooey
A Django app that creates automatic web UIs for Python scripts
Wooey is a simple web interface to run command line Python scripts. Think of it as an easy way to get your scripts up on the web for routine data analysis, file processing, or anything else. The project was inspired by how simply and powerfully sandman could expose users to a database and by how Gooey turns ArgumentParser-based command-line scripts into WxWidgets GUIs. Originally two separate projects (Django-based djangui by Chris Mitchell and Flask-based Wooey by Martin Fitzpatrick) it has... -
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PySchool
Installable / Portable Python Distribution for Everyone.
PySchool is a free and open-source Python distribution intended primarily for students who learn Python and data analysis, but it can also used by scientists, engineering, and data scientists. It includes more than 150 Python packages (full edition) including numpy, pandas, scipy, sympy, keras, scikit-learn, matplotlib, seaborn, beautifulsoup4... -
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NLP Architect
A model library for exploring state-of-the-art deep learning
NLP Architect is an open-source Python library for exploring state-of-the-art deep learning topologies and techniques for optimizing Natural Language Processing and Natural Language Understanding neural networks. The library includes our past and ongoing NLP research and development efforts as part of Intel AI Lab. NLP Architect is designed to be flexible for adding new models, neural network components, data handling methods, and for easy training and running models. NLP Architect is a... -
11
nginx ui
Nginx UI allows you to access and modify the nginx configurations
We use nginx in our company lab environment. It often happens that my colleagues have developed an application that is now deployed in our Stage or Prod environment. To make this application accessible nginx has to be adapted. Most of the time my colleagues don't have permission to access the server and change the configuration files and since I don't feel like doing this for everyone anymore I thought a UI could help us all. If you feel the same way I wish you a lot of fun with the... -
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cntnr
CLI wrapper for basic container (Docker/libpod) management tasks
CLI wrapper for basic container (Docker/libpod) management tasks. This is a Python wrapper script to simplify specific tasks in a container environment. It is designed to work with your container runtime of choice (currently podman and docker). A CLI menu makes these selections possible. This project was created for a lab assignment in NSSA-244 Virtualization at the Rochester Institute of Technology. -
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SiMTraM
"SiMTraM" Simulation of Mixed Traffic Mobility
"SiMTraM" Simulation of Mixed Traffic Mobility is an extension of SUMO (A Traffic Simulator Developed by DLR, Germany) for Heterogeneous traffic. This software is developed by Transportation Lab, IIT Bombay. SiMTraM supports the heterogeneous traffic behaviour often found at developing countries such as India, China and in most of the part of Asia and Middle East continent. SiMTraM also supports the homogeneous traffic found at other part of the world. -
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grenadilla is a lab resource reservation system. It handles booking machines in a lab or server room. grenadilla is written in python, and leverages django.
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