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Showing 4 open source projects for "ming"
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Database mapping layer for MongoDB on Python. Includes schema enforcement and some facilities for schema migration.
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COPEread
Connecting Overlapped Pair-End Reads
COPE (Connecting Overlapped Pair-End reads) is a method to align and connect the illumina sequenced Pair-End reads of which the insert size is smaller than the sum of the two read length.The connected reads can be used in genome assembly, resequencing and transcriptome research. The full citation: COPE: An accurate k-mer based pair-end reads connection tool to facilitate genome assembly Binghang Liu; Jianying Yuan; Siu-Ming Yiu; Zhenyu Li; Yinlong Xie; Yanxiang Chen; Yujian Shi; Hao Zhang; Yingrui Li; Tak-Wah Lam; Ruibang Luo Bioinformatics (2012) 28(22): 2870-2874; doi: 10.1093/bioinformatics/bts563 -
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AlluraSkel
Allura Tool Skeletons
Grab this to try your hand at developing a tool for Allura. Currently supports: - python package setup - simple per-project-installable Tool - simple Ming/MongoDB model - simple TurboGears Controllers - simple Jinja templates -
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