Open Source Mac Simulation Software - Page 53

A 3D interactive simulation that teaches quantum mechanics.

Qspline does quaternion interpolation such that the quaternion and angular rate and acceleration vectors are continuous functions of time, while maintaining quaternion normalization.

### mesh reconstruction from point cloud # filters the input data eliminating noise # creates a quad shell - mesh with inside and thickness ### additional info: - GUI using Clan-Lib SDK

This software is a zip file of a web site to easily design rc airplanes

Web-Service for discrete dynamic systems' model description and simulation. Firstly, recursive procedures of stochastic optimization are added. The framework for open and closed loop model description and simulation.

Simulation environment for evaluation of redundant batch request scenarios. Uses SimGrid.

A matlab/octave based reaction transport model describing microbially mediated isotope fractionation processes in porous media.

RENCO is a C++ based software for automatic generation of ordinary differential equations for gene and protein expression dynamics in artificial regulatory networks.

Robosuite is a modular and extensible simulation framework for robotic manipulation tasks, built on top of MuJoCo. Developed by the ARISE Initiative, Robosuite offers a set of standardized benchmarks and customizable environments designed to advance research in robotic manipulation, control, and imitation learning. It emphasizes realistic simulations and ease of use for both single-task and multi-task learning.

A fast, accurate, and flexible "shoebox" room acoustics simulator that supports both specular and diffuse reflections.

A modeling and simulation tool for Routing problems on Graphs, tccrouter is a java desktop application that provides a 2d map for building graphs and simulating a variety of real world routing solutions: Shortest path, TSP, VRP, VRP-TW. Check Git repository. https://github.com/guilhebl/routerapp

This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A JAGS extension module provides additional distributions including the Pareto family of distributions, the DuMouchel prior and the half-Cauchy prior.

runsbml - Pathway Simulation Tool emulates the dynamics of biological pathways by calculating concentrations of biochemical compounds at different times and conditions.

This software is written in Fortran 90 and is related to forward and inverse problems for the Helmholtz equation in 2-D.

Use SASSIE to generate and manipulate large numbers of molecular structures and then calculate the SAXS, SANS, and neutron reflectivity profiles from atomistic structures. Use for intrinsically disordered proteins. We need alpha-testers and developers.

SCNURS - Side Cut Non-Uniform Residual Stress measurement method for plates, - is a destructive RS measurement method developed in Moscow, Russia and later in Bristol, UK. The method is specifically designed for the measurement of highly non-uniform RS fields, including discontinuities, in plates. This project collects all codes which implement forward and inverse solution to the RS problem. The codes are in modern Fortran with OpenMP. The codes are distributed under 2-clause BSD license. The code uses Lapack (http://netlib.org/lapack), Slatec (http://www.netlib.org/slatec) and CMLIB (http://gams.nist.gov/cgi-bin/serve.cgi/Package/CMLIB) libraries. All these libraries are available as packages on FreeBSD.

Seqsee is a program that extends integer pattern sequences in a human like way.

SFS_CODE (Selection on Finite Sites under COmplex Demographic Events) performs forward population genetic simulations under a general Wright-Fisher model with arbitrary demographic, selective, and mutational effects.

sfunctioner is a GUI wizard written in PyQt for creating Matlab Simulink sfunctions quickly and efficiently. It helps creating a fully functional sfunction within a few minutes.

Energy-, mass- or money-flows are described with simular balances. Usually many upsetting tables are used to calculate the balance. The Software Flow visualizes the data in a grafic, zoomable and animated way.

The program allows the simulation of spatial dynamics in a benthic coral reef community under various environmental settings. Several coral species, with either massive or branching colony growth morphologies are implemented as individual colonies, which compete for space with each other as well as with macroalgae and algal turf. For more details on the first version of the program see also: Kubicek A, Muhando C, Reuter H (2012) Simulations of Long-Term Community Dynamics in Coral Reefs - How Perturbations Shape Trajectories. PLoS Comput Biol 8(11): e1002791. doi:10.1371/journal.pcbi.1002791 http://www.ploscompbiol.org/doi/pcbi.1002791 Version 2.0 of the program assesses feedbacks in coral systems and is published in Kubicek A, Reuter H (2016) Mechanics of multiple feedbacks in benthic coral reef communities. Ecol Modell 329:29-40 doi:10.1016/j.ecolmodel.2016.02.018 http://authors.elsevier.com/a/1SjWD15DJ~lv6v

SIMulation of Biological systems (developed at the TU Munich) This program allows to define ODE-models or stochastic compartemental models of biological processes, to simulate, to fit data and to do some statistics (fitting and statistics for deterministic models only).

simgi is a simulation engine for stochastic simulations of reactive systems using Gillespie's method written in Haskell.

A parallel system simulator kernel that support ultra-large scale computer system simulation.

simplus is c++ library for constructing event driven simulations with a virtual time. Use it e.g. for telecomm., engineering, traffic simulations or simulation based games. It is lean, fast and portable and easily scales to millions of simulated objects.