Allows you to build your own circuits and test them
Neurons to Algorithms - A neural modeling and simulation workbench
Numerical models for chemical and process engineering
Penthode simulates, draw and plot electrical power distributions
Java library of statistical distribution
Visual & persistent families of models for CA, DEVS, and Statecharts
The Future of the Java Circuit Simulator
Statistical data analysis
Growing suite of proteomics simulations for educational purposes
Former home of the Virtual Cell platform (VCell), see http://vcell.org
Simple API for JADE-based Simulations
The Repast Suite is a family of free agent-based modeling libraries.
Managing Ongoing RElationships for Agent-Based Modelling
TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3).
Competition for Resources between Agent Functional Types
YASimCommander is a platform-independent editor for YASIM files.