Showing 68 open source projects for "set"

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  • 1
    JBioFramework

    JBioFramework

    Growing suite of proteomics simulations for educational purposes

    JBioFramework (JBF) is a set of two different chemical separations simulations (2D Electrophoresis and Mass Spectrometry) that are frequently used in chemistry, biochemistry and proteomics research. It is written in the Java programming language and will run on any and all systems that have the JVM installed. As we continue to develop the software over the coming months/years and attempt to quantify the success of our efforts with testing and reviews, user input is very important. ...
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  • 2

    Factory Hardware Emulator

    Emulate MODBUS industrial network with devices.

    FactoryController testing/verification tool. Simulate MODBUS-TCP industrial network with set of devices. Update 2017: Hardware Emulator project has been integrated to main FactoryController codebase and this repository is obsolete.
    Downloads: 0 This Week
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  • 3
    pyMDMix

    pyMDMix

    Molecular dynamics with aqueous-organic solvent mixtures

    This python package aims to help people set up and analyze molecular dynamics simulations in aqueous-organic solvent mixtures. See D. Alvarez-Garcia et al. Journal of Medicinal Chemistry, 2014.
    Downloads: 0 This Week
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  • 4
    C++ Travel Customer Choice Model Library
    That project aims at providing a clean API, and the corresponding C++ implementation, for choosing one item among a set of travel solutions, given demand-related characteristics (e.g., Willingness-To-Pay, preferred airline, preferred cabin, etc.).
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  • 5
    MSP: a 3D flocking boids simulator

    MSP: a 3D flocking boids simulator

    A highly flexible 3D flocking boids simulator, conceived as a tool for

    This project concerns the design and implementation of an open-source flocking boids simulator, designed as a tool to analyze and characterize flock-like collective emerging behaviors. Each boid is conceived as an active agent and modelled by a point-mass approximation. Boid movements in a 3D space are guided by a set of elementary steering behaviors, each implemented as a force acting on the boid's point mass. Each boid is affected by interactions with both the environment and other boids. The set of considered behaviors are inspired by the well-known approach introduced in 1987 by C. W. Reynolds. The simulator delivers a 3D visual interface and provides as an output file all the instantaneous microscopic information related to each boid (positions and velocities over time), allowing in this way subsequent analysis, such as searching for synthetic and higher-level descriptions of collective behaviors, relying for instance on global network and meta-structural properties.
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  • 6

    SMLEditor

    Prototype editor for the SDEM Mapping Language

    The Gateways Team of the Live-Virtual-Constructive Architecture Roadmap Implementation (LVCAR-I) effort is developing a set of tools that will support the gateway community. One of these tools is the Simulation Data Exchange Model (SDEM) Mapping Language (SML) Editor. The tool provides the ability to import two SDEMs in their native language and subsequently view the entities that need to be mapped between the two SDEMs. The SDEM Editor also allows the user to create these mappings and store the result in an SML file.
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  • 7
    Traffic Control Test Set

    Traffic Control Test Set

    A standard test set for evaluating traffic control technologies

    This project contains a standard set of microsimulation models and test configurations for the evaluation of traffic control systems. It also contains an API to enable the straightforward connection of your traffic control system. Use this standard test set to evaluate your traffic control system because it will enable you to benchmark the performance of your system against many others on a level playing field.
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  • 8
    ...There is a similar extension, which use a direct connection to R via rJava/JRI, see http://r-ext.sourceforge.net. This extension is a little bit more complicated to set up but offers some more functionalities (e.g. interactive shell, more plotting functionalities). _______________________________________ Please have also a look on our info page about other NetLogo extensions at http://www.uni-goettingen.de/en/315075.html.
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  • 9
    Charybdis is a Python-driven set of applications for solving partial differential equations on irregular domains.
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  • 10
    QtNet ("Cute-Net") is a QT-based GUI frontend for the "CWSnet" hydraulic simulation toolkit. Similar in spirit to the EPAnet GUI, it is intended to provide a reasonably complete set of features for visualizing and editing hydraulic networks.
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  • 11
    Siafu simulates individual agents and their context, from home to city-wide scenarios. As a developer, you use the API to write your simulation for the purposes of data-set generation, test or visualization, optionally hooking it to your own application.
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  • 12
    A Java library and set of tools to quickly and easily manipulate graphs (set of nodes and edges) and dynamic graphs. The principal trait of this library is its ability to manage (create, edit, layout, display) continuously evolving graphs. The development of this project now takes place on Github. Visit the official Graphstream website at http://graphstream-project.org
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  • 13
    This is a C library with a set of functions that allow the user to evolve biological networks. The user provides a fitness function in C, and the library will do the rest. A few simulation algorithms and examples are included.
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  • 14
    This is a set of Python classes that can be used to simulate dynamic multi-body systems. It used to be a project for studies. Now it is not being worked on anymore, but it is completely GPLized.
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  • 15
    This is a set of tools for simulating fusors/IEC devices in their various forms.
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  • 16
    Plouf is a set of algorithms that solve partial differential equations on sets of connected points. Emphasis is on fluid mechanics and plasma flows.
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  • 17
    netcdf-tools is a set of tools for creating netCDF files. It supports command line use on both Windows and Unix as well as use directly as a Java library. Written by CSIRO Australia and funded by the ANDS Australian Research Data Commons Project
    Downloads: 1 This Week
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  • 18
    Pocket Cube J3D
    Pocket Cube J3D is a simulator of a Pocket Cube, in Java language and Java 3D graphics API. Java 3D is available at: http://www.oracle.com/technetwork/java/javase/tech/index-jsp-138252.html
    Downloads: 0 This Week
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  • 19
    A library making access to the MIT Kemar HRTF set easy, through the use of two functions. UPDATE: Greetings, I have recently started to move over to GitHub and have therefore cloned the project over there. This project will stay open but there won't be any more updates happening here. Any updates (doubt it) will happen over at the new hosting. Thanks!
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  • 20
    A platform for developing mathematical models of static/dynamic physical systems, a simulation evironment for such models and a set of component libraries. It combines features from Simulink, Modelica or AMESim with unique features on its onw.
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  • 21
    Moleculizer is a tool for simulating and generating biochemical reaction networks that are specified through a set of rules for protein-protein interactions.
    Downloads: 2 This Week
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  • 22
    Mangrovia is a tool for automatic complex multilayer topology generation in a compatible format with Network Simulator 2 (ns-2). Based on specs (in xml format), software creates an otcl script. Users can set Bandwidths, Distances, Linking Policies.
    Downloads: 0 This Week
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  • 23
    Given a reference sequence, simhtsd will create a large set of short nucleotide reads, simulating the output from today's high-throughput DNA sequencers, such as the Illumina Genome Analyzer II.
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  • 24
    RNGSHARP is an easy to extend C# library for generating generic objects with a specific probability or random numbers from a wide variety of distributions. Library provides mix distributions system and a way to set output accuracy.
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  • 25
    This compact function parser module written in Fortran95 is intended for applications where a set of Fortran-style mathematical expressions is specified at runtime and is then evaluated for a large number of variable values.
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