Search Results for "bcftools-windows" - Page 3
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Showing 1564 open source projects for "bcftools-windows"
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SolarNetwork
For monitoring and control of distributed generation and consumption
SolarNetwork started as a simple set of client and server tools to collect and analyse solar power information from a distributed network of solar power collectors. SolarNetwork is now expanding into a set of tools to not only collect and analyse information, but to also control and influence behaviour of a distributed network of nodes where energy is being generated and/or consumed. The name implies it is for solar generated energy only, the SolarNetwork can in fact be used with any... -
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FEATool Multiphysics - FEA & CFD Toolbox
FEATool Multiphysics is an easy-to-use FEA and CFD Simulation Toolbox
FEATool Multiphysics (https://www.featool.com) is a fully integrated toolbox for computer aided engineering CAE, finite element analysis & fluid dynamics simulations. With a very easy-to-use GUI, anyone is now able to quickly set up and perform large scale dynamical and complex engineering physics simulations, with coupled fluid flow, heat transfer, structural mechanics, chemical transport, and electromagnetics effects, without having to learn complex programming. In addition to... -
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Virtual Motherboard
Plug&Play Hardware simulation over a virtual bus system.
The Virtual Motherboard provides a specification of a TCP/IP based system bus, a motherboard simulator implementing this specifaction, and a collection of reusable device simulators. It is the perfect start to build new custom hardware simulators. -
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SimulaBeta
A simulation program for insulin-glucose homeostasis.
SimulaBeta is a simulation program for insulin-glucose feedback control. It is based on a nonlinear MiMe-NoCoDI model. -
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PhysiCell
physics-based multicellular simulator
PhysiCell is a cross-platform C++ framework for large, physics-based multicellular simulations. -
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The Mars Simulation Project is an open source Java project to create a simulation of future human settlement on the planet Mars. See https://github.com/mars-sim/mars-sim for the LATEST issues/wiki/code change
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Factory 3D simulation / Digital Twin
Pure Godot Derivative/Fork OIP project.
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SimThyr
A simulation program for thyroid homeostasis.
SimThyr is a continuous simulation program for the human pituitary-thyroid feedback control system. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients. -
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GromacsProSuite
Graphical User Interface for Gromacs
This tool is an integrated graphical interface that simplifies molecular dynamics simulations using Gromacs. It provides a structured, tab-based environment to set up, execute, and analyze simulations data without complex command-line operations. The software automates tasks such as topology generation, solvation, ion addition, minimization, equilibration, and production runs while executing GROMACS commands in the background. Built-in monitoring tracks CPU, RAM, and disk usage to ensure... -
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CFDTool - CFD & OpenFOAM GUI Toolbox
CFDTool - Easy to Use Computational Fluid Dynamics (CFD) Toolbox
CFDTool - "CFD Simulation Made Easy" CFDTool is a fluid dynamics toolbox for modeling and simulation of flows with coupled heat transfer. Based on FEATool Multiphysics (https://www.featool.com), CFDTool is specifically designed to make advanced fluid mechanics and heat transfer simulations both easy and enjoyable. - Completely stand-alone and cross-platform self-contained toolbox - Optionally use as MATLAB Add-On toolbox - Fully integrated and easy to use MATLAB GUI - Modeling and... -
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LINE Solver
Simulation and algorithms for queueing theory
LINE is an open-source software package to analyze queueing models via analytical methods and simulation. The solver is available for Python, MATLAB, C++ and Java. LINE features algorithms for the solution of open queueing systems (e.g., M/M/1, M/M/k, M/G/1, ...), open and closed queueing networks, and layered queueing networks. The LINE discrete event simulator (LDES) covers a broad spectrum of these models. Additional details are available on the project website: http://line-solver.sf.net. -
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Kalypso is an open source application for geospatial modelling and simulation. It is primarily developed to be a user friendly tool for GIS-based modelling and simulation of hydrological and hydraulic numerical models.
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Statistics101 - Resampling Statistics
Use simulation to perform statistical analyses.
Statistics101 is an Integrated Development Environment (IDE) that uses a simple, powerful language called “Resampling Stats” to develop Monte Carlo programs to analyze and solve statistical problems. The original Resampling Stats language and computer program were developed by Dr. Julian Simon (https://www.juliansimon.com/) and Peter Bruce (https://www.scientificamerican.com/author/peter-bruce/) as a new way to teach Statistics to social science students. Of course, social science students... -
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Eleana
Program for the analysis of spectroscopic data, in particular EPR(ESR)
Eleana is a program for manipulating, modifying and analyzing various spectroscopic data, in particular electron paramagnetic resonance spectra. It allows you to import data from Bruker spectrometers such as Elexsys or EMX and data from any ASCII file or imported from the clipboard. The program is under constant development, but already has many functions implemented for spectral analysis. Some of the basic functions include: baseline corrections, filtering, spectral clipping, integration /... -
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GNNPCSAFT Web App
Smart Thermodynamic Modeling with Graph Neural Networks
The GNNPCSAFT Web App is an implementation of our project that focuses on using Graph Neural Networks (GNN) to estimate the pure-component parameters of the Equation of State PC-SAFT. We developed this app so the scientific community can access the model's results easily. In this app, the estimated pure-component parameters can be used to calculate thermodynamic properties and compare them with experimental data from the ThermoML Archive. - CPU-compatible desktop build The standard... -
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QMCF2
Quantum Mechanical Charge Field - Molecular Dynamics
QMCF2 is a molecular-simulation package for molecular dynamics, Monte Carlo, geometry optimization, molecular mechanics, and combined quantum-mechanical/molecular-mechanical calculations. The source includes force-field, electrostatics, constraints, thermostats, pressure control, water models, QMCF/QM-MM, external-QM interfaces, conversion tools, and analysis utilities. Interfaces are available for xTB, DFTB+, Gaussian, Turbomole, CRYSTAL, and ASE-based workflows. External programs must... -
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CyberUnits
Class library for computational cybernetics
CyberUnits is a cross-platform class library for rapid development of high-performance computer simulations in life sciences. It supports modelling for biomedical cybernetics and systems biology with Object Pascal. -
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Zgoubi is a raytracing code. Since 1972 it pushes charged particles through accelerators and beam lines, by stepwise solution of Lorentz force equation - and their spins via Thomas-BMT differential equation. Zgoubi simulates beam dynamics and polarization in a variety of accelerators (storage ring, synchrotron, cyclotron, betatron, microtron, FFAG, multi-pass ERL, etc) and optical systems (beam lines, magnetic and electrostatic optical components, time-of-flight and mass...
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GNNPCSAFT Chat
Chatbot with GNNPCSAFT
The GNNPCSAFT Chat is an implementation of our project that focuses on using Graph Neural Networks (GNN) to estimate the pure-component parameters of the Equation of State PC-SAFT. We developed this app so the scientific community can access the model's results easily. In this app, you can chat with LLM models (Gemini or Ollama) with GNNPCSAFT tools, allowing you to ask questions about the PC-SAFT parameters of various compounds, predict thermodynamic properties, and get insights into the... -
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SIREN
Renewable Energy Network tool
SIREN demonstrates how electricity demand may be met by a mix of renewable energy sources. Users explore potential location and scale of renewable energy sources (stations, storage, transmission) to meet electricity demand. SIREN allows you to build scenarios for the energy mix for your area of interest. It is based around the map of your chosen area and allows you to visualise the layout of the existing electricity network plus the additional stations you place on the map to build your... -
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DEVS-Suite Simulator
Component, CA, and CCA models; superdense time, ETL DB, testing, etc.
Integrated component-based and cellular automata (CA) Parallel DEVS simulator. Version: 8.0 [Aug `26], 7.0 [Jan `23], 6.1 [Apr. `21], 6 [Sep. `20] , 5 [Jul. `19], 4 [Mar. `18], 3 [Apr. `15], 2.1 [Feb. `09], 2 [`03] See PVM: Visual Persistent Hierarchical Component-based Modeler (https://acims.asu.edu/persistent-visual-modeler/ ) and CoSMoSim: hierarchical visual modeling, database model repository, families of models, statecharts, partial-code generation for XML/DEVS-Suite models... -
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EcoLab is a C++ based Agent Based Modelling system, with emphasis on high performance computing for scaling to large simulations.
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Solid body rotation simulator in free space.
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Popppy
Population Propogation in Python. Simulate births, marriages, deaths
...The tool could also be useful and fun for a student, for anyone curious about near-future demographics or CO2 emissions, or curious amateurs. Since it's Open Source (<2000 lines of Python code) you can make your own changes. It runs from the command line and should run on any (MS WIndows, Linux/Unix/Mac OSX) platform running Python 3. A non-Python MS Windows pre-compiled Popppy executable/binary is included for those who just want to run it without having the bother of installing Python 3.x or not wanting to change the source code. -
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Tellurium
Model, simulate, and analyze biochemical systems using one tool.
Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support.
