Free multiphysics simulation software package
Former home of the Virtual Cell platform (VCell), see http://vcell.org
The Repast Suite is a family of free agent-based modeling libraries.
A set of tools for simulating semiconductor nanostructures.
MGSyn - Automatic Synthesis for Industrial Automation
Graphical Interface for Medical Image Analysis and Simulation
The incompressible Navier-Stokes equations solver in 2D domains
Analyze molecular simulation data
An Open source Analysis and SImulation Toolbox for Fuel Cells
Multiscale Neuroscience and Systems Biology Simulator
A finite volume groundwater simulator
3D simulation library
Classical and quantum semiconductor device simulation
Monte-Carlo simulation for ultra-cold neutrons
TCAD Device Simulator
Old PCs' Emulator Series