Open Source Simulation Software - Page 80

The project aims to build a MATHWORKS MATLAB Simulink like IDE environment by utilizing the SystemC and GNU scientific library.

This project will produce a formal, open source System Dynamics information model specification document to rigorously define the set of model objects, their relationships, their attributes, and the operations performed during modeling and simulation.

Interface between SystemBuil and High Level Architecture.

SystemC Network Simulation Library (SCNSL) is an extension of SystemC to allow modelling packet-based networks such as wireless networks, ethernet, fieldbus, etc. As done by basic SystemC for signals on the bus, SCNSL provides primitives to model packet trasmission, reception, contention on the channel and wireless path loss. The use of SCNSL allows the easy and complete modelling of distributed applications of networked embedded systems such as wireless sensor networks, routers, and distributed plant controllers. SCNSL has migrated: please go to GitLab for the latest version: https://gitlab.com/open-kappa/scnsl

SystemC-WMS (Wave Mixed Signal Simulator) is a class library that extends the standard SystemC kernel to allow modeling and simulation of complex systems comprising analog parts from heterogeneous domain (electrical, mechanical, thermal, ...).

SystemML is an XML format for exchange of mathematical systems for numerical simulation. This toolbox offers support for the SystemML infrastructure. It is included in the distributions of SystemML execution clients, but can be installed separately.

The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another. The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ . Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters is highly facilitated. SBFC can be executed in two modes: 1. standalone executable downloading the package provided in this website; 2. web-service at http://www.ebi.ac.uk/biomodels/tools/converters . For general discussion about SBFC, please use the forum sbfc-forum@googlegroups.com . A mailing-list is also available for developers: sbfc-devel@googlegroups.com Thanks for using SBFC! The SBFC Team

The Systems Biology Ontology project (SBO) goal is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being faced in Systems Biology, especially in the context of computational modeling. !!!! Important Announcement !!!! We have moved the curation and development of Systems Biology Ontology (SBO) to a git-hub repository https://github.com/EBI-BioModels/SBO. Hence, this SourceForge SBO project has also been retired. Please use the Git-Hub issue tracker https://github.com/EBI-BioModels/SBO/issues to request the addition of new terms.

This project has been moved to https://github.com/draeger-lab/SBSCL.

Trading Agent Competition (TAC) is an international forum designed to promote and encourage high quality research into the trading agent problem. The TAC SCM open-source software consists of a Java-based Game Server and and library for developing agents.

A tool of input-file preparation and visualization for xTAPP, an application of the first-principle calculation. By graphical user interface (GUI), this application helps xTAPP users for making input files, and visualizes results of wavefunctions, electron densities, and potential profiles into three-dimensional graphics from output files.

Turkish Airborne Simulator is a 3D flight simulation. You can fly above the all earth surface or roam the earth with using mouse like Google Earth. TAsim is based on OpenSceneGraph and VirtualPlanetBuilder.

A collection of cross-platform C++ modules used to build aerostat simulation and analysis programs.

The Tomographic Image Reconstruction Interface of the Universite de Sherbrooke (TIRIUS) is a Qt-based user-interface software for reconstructing 3D images from data generated by real apparatus or generated by the GATE Monte Carlo simulator.

Im Simulator können Turingmaschinenprogramme in Tabellenform geschrieben, gespeichert und ausgedruckt werden.

Turing Machine Simulator. Released for testing purpose.

TOAST (Trust Organisational Agent System Testbed) is a simulation framework used to evaluate and compare different trust models for agents embedded in organisational systems.

The tofsims project is an R/Bioconductor toolkit designed for processing, analyzing, and visualizing imaging mass spectrometry data from Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) instruments. It supports importing raw and preprocessed data from popular instrument platforms (e.g. IONTOF, Ulvac-Phi) and provides methods for mass calibration, peak picking, and peak integration. The package allows transformation of spectra into 2D image structures (mass images), with operations such as binning, scaling, subsetting, and visual rendering. For data exploration and dimensionality reduction, it includes multivariate methods common in the ToF-SIMS community: PCA (Principal Component Analysis), MCR (Multivariate Curve Resolution), MAF (Maximum Autocorrelation Factors), and MNF (Minimum Noise Fraction). It also interoperates with Bioconductor’s imaging stack (e.g. EBImage) so users can apply segmentation and image analysis operations on mass images.

TOPO is a simple tool that allows the user to create and manipulate arbitrary Wireless Sensor Network (WSN) topologies without worrying about the anomalies that could arise using a text-base topology description. It is fast and easy to use and can accelerate small scale projects such as network simulation. The tool is still undergoing development stage and is open to extension. One the candidate component to be soon integrated is a WSN discrete event simulator.

The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.

TRMSim-WSN (Trust and Reputation Models Simulator for Wireless Sensor Networks) is a Java-based simulator aimed to test Trust and Reputation models for WSNs. It provides several Trust and Reputation models and new ones can be easily added.

Tina's Random Number Generator Library (TRNG) is a state of the art C++ pseudo-random number generator library for sequential and parallel Monte Carlo simulations.

This TRNSYS type allows for a bi-directional communication between TRNSYS and Java. After specifying the number of inputs and outputs of the type within the TRNSYS enviornment, respective links to other components can be established. In every simulation step, the type consumes a certain amount of inputs and sends the values to Java. Based on this, a certain amount of outputs is generated in Java, send back to TRNSYS and used as the type's output for the current simulation step. The communication between the TRNSYS type and the Java class is based on the Java Native Interface (JNI).

TROPICS - Trajectory of Particle In a Crystal Simulator программный комплекс для моделирования траекторий движения быстрых заряженных частиц в осевых и плоскостных каналах кристалла под ОС Windows и Linux. Комплекс легко расширяется плагинами, может работать как в графическом режиме, так и в консольном для простого встраивания в другие программы. Комплекс обладает богатым количеством возможностей и настроек. Для построения графиков используется графическая библиотека MathGL (http://mathgl.sf.net/).

TSimPanel provides a progress bar for your simulation programs with only a few modification costs.