Search Results for "gnu science" - Page 17
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Showing 1074 open source projects for "gnu science"
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Depolarization analysis tools
Tools for the accurate analysis of Raman depolarization measurement
This programme addresses the notoriously difficult problem to quantitatively link measured Raman depolarization values to theoretical polarizability tensor quantities, since quantum calculations do not incorporate experimental parameters. A numerical model is programme to calculate, for realistic experimental configurations, effective Raman line strength functions, which find their way into depolarization ratios. The model is based on interlinked integrations over the angles in the light... -
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Fast flexible simulator of spiking neural networks. Easy to use graphical user interface with comprehensive monitoring facilities. Integrates with the NeMo CUDA simulator and the iSpike interface for the iCub robot.
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GemSIM is a software package for generating realistic simulated next-generation sequencing reads with quality score values. Both Illumina and Roche/454 reads (single or paired end) can be simulated using appropriate empirical error models.
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A collection of classes and functions that can be used to simulate 802.11 (a or p) physical layer operations. Makes use of the IT++ library and contains several receiver implementations as well as channel models and simulation examples.
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EpiFire GUI is a graphical user interface for simulating epidemics on contact networks (C++/Qt, available under GPLv3). For source code and the EpiFire C++ API (for programmers, also GPLv3), go to http://github.com/tjhladish/EpiFire/wiki
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Bitte neue Website des aktuellen sourceforge Projekts PF_HP beachten! Please see new Website of the current sourceforge project PF_HP! Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die Proteinfaltung. Spende einen Cappuccino: Bitcoin: 1HqrdnfQgi9B4LW8UEvLAwh7X5gXPCoQ5B Litecoin:...
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Rand Tree
Random Tree Generator for MatLab
RandTree is a MatLab based tree simulator program where the algorithm is based on Honda's model. We have used probabilistic generation of branches in order to simulate visually realistic tree structures. This program is designed to generate branching structures with bifurcation branching pattern (sympodial branching). By changing the probabilities and branching angles, you can generate different shapes of trees. -
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YANG (Yet Another Network Generator - Java) enables you to generate social networks given various social rules observed in the real population. Uses: generate realistic networks to be used in individual-centric models, teaching or benchmarking.
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Bio.Cairn is a library of highly-configurable high-performance modules to support numerical simulators for biological processes. Written in ANSI-standard C++, it makes extensive use of template metaprogramming and the BOOST libraries.
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nanoTuring
A minimal Turing machine simulator
https://github.com/thibaultduponchelle/nanoturing -
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Bugale N-Body Data Editor
Edit/create settings and data files(.bdf) of Bugale N-Body Simulator.
This project simply provides a convenient graphic user interface to create and edit the data files (simulation settings and body properties) for Bugale N-Body Simulator. You can find the Bugale N-Body Simulator project here: https://sourceforge.net/projects/bugalesimulator/ You must have Microsoft .NET Framework 2.0 (or later) installed on your system in order to use this editor: http://www.microsoft.com/download/en/details.aspx?id=21 -
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Bugale N-Body Simulator
A simple N-Body simulator.
This project simulates the behavior, dynamics, and motion of a group of celestial objects. Given N point masses in a three-dimensional space, its present positions and velocities, and supposing that the force of attraction experienced between each pair of particles is Newtonian, the project approximately predicts it's positions and velocities at a future moment of time. The project can visualize the simulation, and create a graphic real-time output using FreeGLUT, and also have an... -
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QDC (quick direct-method controlled) is an optimized exact implementation of the Gillespie's direct-method. It is designed for biochemical simulations when there is the need of dynamic parameters whose values can change during the simulation.
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wavefront
2D Finite Element Analysis for Acoustics
Wavefront is a programme for simulating 2D acoustic systems, with a particular emphasis on determining wavefront shapes at the mouths of horns. It accepts CAD drawings in DXF format and produces animated displays of wave propagation as well as exporting various data as text files. It is GPL software and runns on Linux and Windows. -
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TRMSim-WSN (Trust and Reputation Models Simulator for Wireless Sensor Networks) is a Java-based simulator aimed to test Trust and Reputation models for WSNs. It provides several Trust and Reputation models and new ones can be easily added.
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The software is related to the PhD thesis of Zoltán Farkas, used to simulate work distribution and processing in hierarchical desktop grid systems.
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SMMP (Simple Molecular Mechanics for Proteins) is a program library for protein simulations with an emphasis on advanced Monte Carlo algorithms. It includes various force fields to calculate the energy of a protein and protein-protein interactions.
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smPla
SystemVerilog module to substitute Verilog PLA system tasks.
SystemVerilog module that models the following PLA system tasks of Verilog: $a/sync$and$array $a/sync$nand$array $a/sync$or$array $a/sync$nor$array $a/sync$and$plane $a/sync$nand$plane $a/sync$or$plane $a/sync$nor$plane. -
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The goal of this project is to provide a platform for simulating biological aging and evolution of the population. The simulation is done using Penna bit-string model. Its based on the mutation accumulation theory.
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Famms is a Python module for applying the method of manufactured solutions (MMS) to PDE simulators written in C/C++, Fortran, and Python.
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A sleep research experiment manager, EDF (EEG, EMG etc) with power spectrum analysis and visualisation, and Process S ('sleep pressure') estimation following Achermann et al (1993).
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A language and a compiler for the solution of differential equations (ODE). Both lumped and distributed variables (PDE) will be possible. The ability to solve DAEs is a long term goal. The compiler generates a Python program that does the computation.
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NetLogo is a software platform for agent-based modelling. Here we present an R extension of NetLogo. It adds new NetLogo primitives New locations: R-Extension: http://r-ext.sourceforge.net Rserve-Extension: http://rserve-ext.sourceforge.net
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TuringIDE is an integrated development environment (IDE) for simulating Turing Machines with multiple tapes and states. It offers debugging tools, XML import/export, and other advanced features for scientific experiments on formal symbol allocations.
