Search Results for "java workflow"
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Showing 25 open source projects for "java workflow"
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JeeSite
A basic enterprise information development platform
JeeSite is a high-efficiency, high-performance, and strong security open source Java EE rapid development platform based on a number of excellent open source projects, highly integrated and packaged. JeeSite is the best basic platform solution for you to quickly complete your project. JeeSite is the best study case for you to learn the Java platform. JeeSite is also the best assistant for private work. JeeSite is a Java-based development platform built on the Spring Framework, with Spring MVC as the model view controller, MyBatis as the data access layer, Apache Shiro as the authority authorization layer, Ehcahe for caching common data, and Activit as the workflow engine. ... -
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AMBIT:Chemical Structure DB&Web Service
Chemical structures database & machine learning with web services API
AMBIT offers a cheminformatics data management for chemical substances, structures and nanomaterials. Flexible structure, similarity and study queries storage, descriptor calculation and predictive models building via REST web services.User interface for creating read across assessment and generating reports, aligned with regulatory and industrial requirements. Command line applications also available. Integration with third party tools and databases. -
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123FASTQ
An intuitive and efficient tool for preprocessing Illumina FASTQ reads
123FASTQ performs the preprocessing of Illumina next-generation sequencing reads (FASTQ files), making the workflow easier and more accessible than ever. Download the quick user manual for the latest version: https://dl.adbioinformatics.net/NGSNeeds/myTools/123Fastq_v1.3_Manual.pdf **Authors:** Milad Eidi Samaneh Abdolalizadeh Mohammad Hossein Nassirpour **Supervisors:** Javad Zahiri, PhD University of California San Diego Masoud Garshasbi, PhD Tarbiat Modares University,... -
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The bflow* Toolbox is an open source tool kit for business process management. The objective of bflow* is to explore new ways and scenarios for the development and use of modelling tools.
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SEWOL: Security-oriented Workflow Lib
Java Library for workflow handling
SEWOL provides support for the handling of workflow traces. It allows to specify the shape and content of process traces in terms of entries representing the execution of a specific workflow activity. Currently it supports plain text, Petrify, MXML and XES log file types. In order to specify security-related context information, SEWOL provides access control models such as access control lists (ACL) and role-based access control models (RBAC). SEWOL uses and encloses the following... -
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WOLFGANG
Editor for Petri nets
Wolfgang is a lightweight tool that allows users to easily create and edit Petri nets and check them against general and workflow specific net properties. Specifically, Wolfgang supports full PNML conform editing functionality of Place-Transition Nets (P/T-Nets) and Colored Petri Nets (CPN) as they are defined in the SEPIA package. Its simple and easy to use interface allows to quickly create Petri nets from scratch, edit them graphically in many ways, store and even export them as PDFs. Use... -
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SEPIA: Security-oriented PN Framework
Petri net framework for security related modeling and reasoning.
SEPIA provides implementations for various types of Petri nets. Along Place/Transition-nets, it supports Petri nets with distinguishable token colors and defines coloured workflow nets, where coloured tokens are interpreted as data elements used during process execution. To support information flow analysis of processes, SEPIA defines so-called IF-Nets, tailored for security-oriented workflow modeling which enable users to assign security-levels (HIGH, LOW) to transitions, data elements and... -
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fPotencia
Power flow library in C++
fPotencia is the fruit of free time and passion for power systems simulation. After observing the lack of ready-to-implement libraries for power system analisys, and that the existing ones focus on command line workflow, I decided myself to start a project to fill the gap. Since Power system simulations have started needing to be executed in parallel, the old C-like designs are outdated; modular design is now needed to launch many simulations at the same time based on a base circuit. fPotencia is programmed in C++, but my intention is to bring JAVA, C#, Python and perhaps MATLAB versions of it. ... -
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Opal is a toolkit for wrapping scientific applications as Web services on Cluster, Grid and Cloud resources with ease. Users may access these software as a service using simple Web service APIs from their custom application and workflow environment.
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Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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ADOPS
Automatic Detection Of Positively Selected Sites
ADOPS is a bioinformatics tool that automatizes the detection of positively selected sites given a set of unaligned nucleotide sequence data. ADOPS implements a complete workflow that integrates three well-known bioinformatic tools: T-Coffee, MrBayes and Codeml (PAML). -
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MCloudSim/NovaCloudSim
a distributed cloud simulator written in Java
MCloudSim(formerly called NovaCloudSim) is a simulator written in Java for geographically distributed clouds. The software is modified from CloudSim 3.0, which is an open source data center simulator. All functions of CloudSim are reserved, and our newly added files are in the package org.cloudbus.cloudsim.nova. MCloudSim has following characteristics: (1) The overlay protocol can be freely replaced, and we have already ported Pastry, Kadmelia, Chord from PeerSim; (2) A Petri-Net workflow theory based task model is implemented to simulate distributed tasks; (3) A distributed cloud can be easily built by assembling and expanding the basic resource entities provided by the simulator... -
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Linking Yabi with RDA
This software system enables publication of YABI workflows to the RDA.
Modern life science research requires bringing together Biology and Information technology. To help make this process easier, the CCG has developed YABI, an Internet based workflow application that is aimed at biologists who wish to conduct bioinformatics analysis. YABI integrates bioinformatics tools and data via an intuitive workflow creation and management environment. YABI can be used to access the NCI-SF in Bioinformatics and the tools available through the Embl Australia EBI mirror... -
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K people is a software platform capable of integrating with enterprise systems. It enables workers to improve productivity, while giving management the the means to plan and monitor activity.
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PSIGHOS is a Java-based simulation library. PSIGHOS is focused on the simulation of business processes and comprises a parallel core so to reduce the execution time for large models.
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Singularity is a suite of RFID Middleware to support RFID enabled Supply Chain Management, integration to the enterprise, and EPCglobal. It includes edge services for device management, event filtering, workflow, as well as integration components.
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Taverna 1.x (archived)
Scientific workflow system
Taverna is *no longer* hosted on SourceForge, but has moved to the Apache Software Foundation: https://taverna.apache.org These pages and mailing list archives are provided for *archival purposes* for older Taverna 1.x releases. See https://taverna.apache.org/download/ for the latest releases from Apache Taverna. -
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The project is targeted at building a framework for describing businesses with natural language or structured natural language. Starting from these definitions different components for automated code and workflow generation will be integrated
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This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
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E-BioFlow enables the scientists to design workflow using three different perspectives: control flow, data flow and resource perspective. The workflow tool is based on the Yawl engine and has support for BioMOBY and WSDL services and Perl and R scripts.
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http://ewi.utwente.nl/~biorange/rshell - The RShell project is a plugin for the Taverna workflow system. It enables one to execute R scripts within the Taverna workflow system. The RShell processor is built on the RServe project. For more info:
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A traslator from BPEL4WS processes to YAWL workflows that works with translation patterns. It takes a BPEL document in input and creates a YAWL workflow that rapresents it.
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Sight provides a friendly interface to create and connect agents for bioinformatics. The workflow supports multiple responses to a single request, structure transforms, filters and request history access.Can talk with ordinary http servers (get and post)
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A knowledgment management system written in Java under JBoss 4.2.3 Server, with richfaces 3.3.0BETA4. Including fileconversion from html to pdf and rich:editor component without special syntaxing.
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Types: -Meeting with Clients -CAD dispatch -Worflow -SOA and inter network workflow -Interprocess communication -Batch jobs -Large scale integration -Manufacturing System and Systems -Personal -Employee -Project -Robot / Robots / Robotic
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