Showing 14 open source projects for "icmp data modification"

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  • 1
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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    Downloads: 36 This Week
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  • 2
    QUCAS-Quantum-Cosmology-Integration

    QUCAS-Quantum-Cosmology-Integration

    NOTICE OF CONSOLIDATION & PARTNERSHIP PENDING As of April 2026, the 20

    NOTICE OF CONSOLIDATION & PARTNERSHIP PENDING As of April 2026, the 20 pipelines of the QCAUS/PDPBioGen suites are undergoing consolidation for high-scale institutional research. Core 'Ford 2026' algorithms remain the proprietary IP of the Ford Peace and Justice Foundation. Academic users at partner institutions are currently performing validation; all other commercial inquiries must contact the author License: Dual 🔬 Overview A complete computational framework for cosmological...
    Downloads: 1 This Week
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  • 3

    ModST

    A tool to search post-translational modifications in a blind mode

    ModST (pronounced as modest) is a tool to search post-translational modifications (PTMs) in mass spectrometry data in an unrestrictive manner. It can search for hundreds of modification without any user provided information for variable modifications. Due to data level parallelization implemented through perl it is fast, portable and easy to use to identify and analyse PTMs in MS/MS data.
    Downloads: 0 This Week
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  • 4
    KMWin

    KMWin

    Kaplan-Meier for Windows

    KMWin (Kaplan-Meier for Windows) is a convenient tool for graphical presentation of results from Kaplan-Meier survival time analysis. The programme is based on the statistical software environment R and provides an easy to use graphical interface. As an introduction, see http://dx.plos.org/10.1371/journal.pone.0038960#s2.
    Downloads: 0 This Week
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  • 5
    Free_Balistic

    Free_Balistic

    Input physical measures, calculate and show ballistic curve chart.

    This application is intended to give abilities of calculating physical measures and draw charts, related to the aspect of the movement of sphere - shaped projectiles, ejected to reach some range. With the help of FreeBalistic you can fast calculate such measures as: height of bullet after specified time, height for given range, max height of bullet, range after given time, range to get max height, range to the end of move, time to get given range, time to get max height, time to get end of...
    Downloads: 0 This Week
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  • 6

    IOA AM code

    Implementation of the core routine for AM analysis from the IOA AMWG

    ...It is written in the Python language which is freely available. V1.5 is compiled for Windows (XP onwards). The responsibility for the correct implementation and application of the software or any modification thereof rests with the end user. It should not be taken as agreement from the IOA or the AMWG that any results produced by this code are recommended or agreed. The example software does not represent an analysis method and requires correct inputs parameters and data, and interpretation of the results. All users should have a suitable understanding of the IOA AMWG document on which this code is based. ...
    Downloads: 0 This Week
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  • 7
    CoverageAnalyzer

    CoverageAnalyzer

    RNA modification detection by RT signatures in deep sequencing data

    ...Common alignment viewers lack in specialized functionality, such as filtering, tailored visualization, differential analysis and export. Consequently, the community will profit from a platform seamlessly connecting detailed visual inspection of RT signatures and automated screening for modification candidates. CoverageAnalyzer was developed in response to the demand for a powerful inspection tool, running on all 3 OSes. With SAM standard as input and an intuitive GUI, even non-experts can accomplish a variety of tasks, from visualization of RNA Seq data, up to sophisticated modification analysis with significance-based candidate calling.
    Downloads: 0 This Week
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  • 8
    Ava: Testdata Xsl

    Ava: Testdata Xsl

    generates Testdata on base of excel: creates xml,excel,csv,html,sql,+

    this tool for test-data-generation receives an 'excel-sheet' as primary input. second important paramter is the 'number of test-records to produce'. The excel-data will be reused as long data is needed. This tool is hightly paramatrisazable by the use of 'xsl scripts'. data can be created, updated, modified and finally exported in a format of your choice Main Fuctions: (1) Generates Testdata (excel, xsl, xml) (2) Exports generated testdata in multiple formats (csv, excel, html,...
    Downloads: 0 This Week
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  • 9
    KineticaRT V4

    KineticaRT V4

    Windows software for fast instrumentation and control systems

    KineticaRT allows you to build software instrumentation and control systems with fast screen updates, adaptable graphics and easy configuration. It supports simultaneous display and configuration while running. Using it, you can animate meters, gauges, trend graphs and many other items accurately and effectively. KineticaRT achieves its principal design aims of speed and usability by means of configurable display objects - inherently faster than animated user-drawn graphics. Easy to...
    Downloads: 0 This Week
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  • 10
    ...STRAP PTM (Software Tool for Rapid Annotation of Proteins: Post-Translational Modification edition) helps to recognize global, differential post-translational modifications in large proteomics data sets. For more information about STRAP PTM or to download the program, please visit http://www.bumc.bu.edu/cardiovascularproteomics/cpctools/strap-ptm/.
    Downloads: 0 This Week
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  • 11
    Knitter produces a 3-dimensional model of a knitting pattern. It supports KnitML, as well as a native language similar to that of traditional knitting patterns.
    Downloads: 0 This Week
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  • 12
    Tailorshop: Optimization based Analysis and data Generation tOol. Support tool for the computer test scenario "Tailorshop" that is the basis for many psychological studies. Data can be generated, visualized, and provided to optimization solvers.
    Downloads: 0 This Week
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  • 13
    Weka-Parallel is a modification to Weka, created with the intention of being able to harness the power of Weka and the speed of parallel processing to be able to run a number of data mining and machine learning algorithms quickly.
    Downloads: 0 This Week
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  • 14
    FEVal, the Finite Element Evaluator written in Python, provides easy conversion for many Finite Element data formats (both binary and ascii). Mesh modification is very easy. Values of model results can be accessed given coordinates in physical space.
    Downloads: 0 This Week
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