Search Results for "data processing" - Page 9

FluxY is a command line based high-throughput processing tool set for stable isotope labelled mass spectral data used for metabolic flux analysis. To get started simply download and unzip the FluxY.zip file and follow the getting started document in the Instructions folder.

A MATLAB package for wavelet analysis of circadian rhythms with both discrete (Daubechies) and continuous (Morlet) wavelets, as well as tools for batch processing of multiple time series, all accessible through a graphical user interface.

...The main focus of this project is the development of a high-performance routing engine that can handle a variety of routing and vehicle constraints on demand without additional pre-processing of the road network. An additional goal is the development of a class library centered around a built-in, object-oriented database used for processing and storing OSM map data such that external dependencies (e.g. external database servers) are minimized.

CRFSharp(aka CRF#) is a .NET(C#) implementation of Conditional Random Fields, an machine learning algorithm for learning from labeled sequences of examples. It is widely used in Natural Language Process (NLP) tasks, for example: word breaker, postagging, named entity recognized, query chunking and so on. CRF#'s mainly algorithm is the same as CRF++ written by Taku Kudo. It encodes model parameters by L-BFGS. Moreover, it has many significant improvement than CRF++, such as totally...

This software uses computer vision algorithms for mining sequence data from telemonitoring data with CBRs. We propose an approach which treats the detection of changes in behavior detected with a sensor/video fusion, which occur at radically different time-scales, through a CBR in two levels: low and high level. The system is always updating the database with the daily data.

TotalDepth is an Open Source, cross platform, software collection that can process petrophysical data from the oil field such as wireline logs, seismic data and so on. Conventional, proprietary, software for petrophysical data tends to be expensive to licence, restrictive, slow to develop for and tied to expensive hardware. TotalDepth changes all of that. TotalDepth is open and cross-platform, and produces results straight to the bowser. TotalDepth supports such technologies such as...

SemaRule Navigator is an Integrated Suite of Open-Source and Free-License Software, placing Semantic and Text Analysis Technologies in the toolbox of Researchers, Students, and Enterprises.

RAT is a software for advanced image processing of SAR (Synthetic Aperture Radar) remote sensing data.

PDFgetN is a program to process total scattering data obtained on neutron time-of-flight powder diffractometers and to obtain the atomic pair distribution function (PDF).

GoFigure2 is an open-source, cross-platform application for visualizing, processing and analyzing of multidimensional microscopy data. Users can visualize, segment and track cells through time, detect cell-division and ultimately generate lineages.

The original C# .NET 4.0 DICOM library designed for rapid development of DICOM applications. the new library can be found at evildicom.rexcardan.com. The website has maintenance planned for 08.21.12 and will be down.

This is a Java-based project for complex event extraction from text and co-reference resolution. Currently the code can read BioNLP shared task format (http://2011.bionlp-st.org/) and i2b2 Natural Language Processing for Clinical Data shared task format (https://www.i2b2.org/NLP/DataSets/Main.php). Event extraction includes finding events and the parameters for an event in a text. The method is based on SVM but other ML algorithms can be adopted. The method details are explained in the following paper: Ehsan Emadzadeh, Azadeh Nikfarjam, and Graciela Gonzalez. 2011. ...

This software allows for a user to generate test data. This is useful for testing Hadoop or other data processing clusters.

ELIA(Eyegaze Language Integration Analysis) supports the analysis of eye-tracking data for studies in language processing. ELIA eases early analysis of data to enable iterative development of experiments in response to spoken language.

...It is still the 32 bit version. Plans failed to develop. Vector Raster Geographic Information Synthesis for 64 bit computers using dual or large screens. Incorporates : Vector processing, Raster Image processing, Digital Elevation Model (DEM) processing. These data can be combined to be viewed in 3D.

Vector Raster Geographic Information Synthesis. Incorporates Vector: Vector processing, Image processing, Digital Elevation Model DEM processing. These data can be combined to be viewed in 3D. Multitude of system organization aids.

A GPR processer and viewer written in Python!

PySpline is a graphical, cross-platform program for processing X-ray absorption spectroscopy (XAS) and Extended X-ray absorption fine structure (EXAFS) data. It allows processing parameters to be adjusted and observe the effect on R-space data.

Developed at Medical Research Council UK to meet a common clinical trial need to track various types of clinical data. Users log dates of completed tasks against participant ID. Simple, useable, reduces lost data! Makes graphical progress reports.

This is a set of scripts that helps with processing of NMR pH titration data. These scripts allow for fitting (using R) and plotting of data of multiple residues. The program needs to be made more user friendly.

TIDAL is a collection of data acquisition and processing tools for research in respiratory physiology. It provides a high-level language for specifying experimental protocols and required computations.

Image analysis program that extract the movements of the bacteria from digitised movies and data processing associated.

BIL++ is a set of standalone C++ packages for data processing in Bioinformatics (Graph mining, Bayesian networks, Genetic algorithm, Discretization, Gene expression data analysis, Hypothesis testing).

ASSD is a simple biological sample database focused on the storage of proteomics data. It tracks every processing step incl. results throughout a sample's lifetime. Next to proteomics data it can also store other results like FACS or Western Blots.

Knime (http://www.knime.org) nodes for sequence bioinformatics. Sequime is an eclipse plug-in for the KNIME data mining platform, providing additional nodes for reading, processing and visualizing sequence information.