Showing 4378 open source projects for "java"

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  • 1
    Used to record and analyze some behavioural experiments in neuroscience (using usb webcam). it was developed in collaboration with neuropharmacology lab at Faculty of Medicine, Ain Shams University. it can use(JMF,OpenCV,JMyron & AGCamLib) for webcam
    Downloads: 0 This Week
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  • 2
    The goal of this project is to combine different sources of information as well as methods to help in the process of gap closing / genome finishing in high throughput sequencing.
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  • 3

    FishingCNV

    Copy number variation (CNV) detection in exome sequencing data

    FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases.
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  • 4
    LSA-Bot is a new, powerful kind of Chat-bot incentred on Latent Semantic Analisys. Using LSA it's possible to make relationships among words and vectors, permitting to realize an intelligent chat-bot that can understand human language and answer as
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  • 5

    MendelScan

    Variant scoring and linkage mapping for family exome sequencing

    MendelScan is a tool for prioritizing candidate variants in family-based studies of inherited disease.
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  • 6
    Allows you to monitor the operation of a machine with communication with your PC via Serial, USB and the network. Monitora written in Java needs: JFreeChart, XStream, USBDevice, winjcomport(windows), RXTX(linux).
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  • 7

    Vodou

    3D-HMI for factory automation

    Vodou is 3 dimensional human machine interface for factory automation. Easy to use setup along with full physical simulation of the production asset is incorporated with Vodou.
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  • 8
    HYDRA is an open-source, platform-neutral library for performing Markov Chain Monte Carlo. It implements the logic of standard MCMC samplers within a framework designed to be easy to use and to extend while allowing integration with other software to
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  • 9

    FlyDataAnalyzer

    Software Tool for Processing and Analysis of Propagating Channel Measu

    Software Tool for Processing and Analysis of Propagating Channel Measurements. Fly Data Analyzer is the university project (CTU in Prague). It is used in research measurements for input data validation and time synchronization. Test data you can find in download section.
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  • 10
    Java Virtual Petrographic Microscope

    Java Virtual Petrographic Microscope

    A virtual petrographic microscope for geologists

    A free virtual petrographic microscope application which allows users to examine and explore minerals and rocks features. jVPM makes mineralogy to be easier to examine a thin section and to understand the characteristic properties for each mineral without a petrographic microscope, which is known to be very expensive. It is mainly addressed to students as a guide in individual or supervised laboratory work.
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  • 11

    TML - Text Mining Library for LSA & CMM

    TML is a Java Library for LSA and extracting Concept Maps from text

    TML has moved to http://www.villalon.cl/tml.html and the code to https://github.com/villalon/tml
    Downloads: 0 This Week
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  • 12
    AsphaltOpen is a project to visualize data collected during road asphalting operations. Asphalt contractors can use the software to visualize their operations, learn from the visualizations, and improve their processes continually.
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  • 13

    BioLemmatizer

    Lemmatization tool for morphological analysis of biomedical literature

    The BioLemmatizer is a domain-specific lemmatization tool for the morphological analysis of biomedical literature. It is tailored to the biological domain through integration of several published lexical resources related to molecular biology. It focuses on the inflectional morphology of English, including the plural form of nouns, the conjugations of verbs, and the comparative and superlative form of adjectives and adverbs. README:...
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  • 14

    GDLEditor

    Web-based editor for the Gateway Description Language (GDL).

    Web-based editor for the Gateway Description Language (GDL).
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  • 15
    Laboratory Logbook
    The LabLog is a free tool to document projects running in a lab and to manage experimentally obtained data and its metadata. LabLog interfaces to a mySQL database that stores this information. Allows easy searching and retrieval of once recorded data.
    Downloads: 2 This Week
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  • 16
    The Penn Lambda Calculator is an interactive, graphics-based pedagogical software that helps students of linguistics and computer science practice the typed lambda calculus.
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  • 17
    MpcReader retrieves comet and asteroid orbital data in MPC format from the web and store it on your computer in different formats. The data is fetched from the MPC. The main job of MpcReader is to convert plain MPC data to the format needed for KStar
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  • 18

    astroDevice

    Software platform for the control of astronomical instruments.

    astroDevice is a software platform for the control of astronomical instruments (telescope mount, filter wheel, focuser and CCD) through a single interface. This platform manages any astronomical device through plug-ins. It can manage multiple devices of same type (eg two telescope mounts). astroDevice is an alternative to ASCOM and INDI by providing a common interface between each device type and astronomy software such as Starry Night, KStars, Skychart and Stellarium. The platform is based...
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  • 19
    Parallel Iterative Deconvolution is a multithreaded ImageJ plugin for iterative image deblurring.
    Downloads: 6 This Week
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  • 20
    RouteConverter is another route conversion tool. It helps me and I hope it could help you.
    Downloads: 1 This Week
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  • 21
    Parallel Spectral Deconvolution is a multithreaded ImageJ plugin for spectral image deblurring.
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    Downloads: 5 This Week
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  • 22
    GISBox by Citiviz

    GISBox by Citiviz

    Ready-to-use appliance for GIS, Data Mining and Analysis, Modelling...

    GISBox by Citiviz is a ready-to-use virtual appliance containing an assortment of powerful, free and open source GIS, Data Mining and Analysis, Modelling and Programming software and packages. The pre-configured and tested GISBox allows you to try and use in few minutes a variety of software used by data scientists, engineers, physicists, mathematicians, geomatics engineers, and geographers from around the globe, without installing anything more than once the Oracle VirtualBox™ software...
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  • 23

    MatrixMaker

    Custom substitution matrix creator

    Create custom substitution matrices for BLAST protein search. Easy to use GUI based application.
    Downloads: 0 This Week
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  • 24
    Parallel HRRT Deconvolution is a multithreaded ImageJ plugin for motion correction of PET brain images.
    Downloads: 0 This Week
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  • 25

    ViSEN

    Visualization tool for statistical epistasis networks

    The objective of this project is to provide a graphical visualization for statistical epistasis.  Pairwise and three-way epistatic interactions are measured using information gain and are represented using networks.
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