Search Results for "python software" - Page 4
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Showing 559 open source projects for "python software"
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CemCon
Automated SMILES-to-optimized 3D molecular structure converter
CemCon is a desktop application developed for automated batch conversion of SMILES strings into optimized 3D molecular structures. The software is designed to simplify ligand preparation workflows for molecular docking, virtual screening, molecular dynamics simulations, and other Computer-Aided Drug Design (CADD) applications. Developed by Abhijit Reang and Sandip Das under the supervision of Dr. Arabinda Ghosh, Department of Molecular Biology and Bioinformatics, Tripura University,... -
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pyLogos
Qualitative content analysis software.
pyLogos is a program to support text content analysis. Documents (imported from txt and docx files) are stored in a database, and may have marked text segments associated with codes. It is possible to retrieve these segments in various ways, generate word clouds, tabulate frequency of codes and words, among other outputs. pyLogos é um programa de apoio à análise de conteúdo de textos. Documentos (importados de arquivos txt e docx) são armazenados numa base de dados, podendo ter segmentos... -
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QChartist
Free and Open Source Technical Analysis Charting Software
QChartist is a free and open source technical analysis charting software. Its purpose is to provide a complete set of tools to perform technical analysis on charts and data. It helps to make forecasts mainly for markets but can also be used for weather or any quantifiable data. The program is flexible and its functionalities can be easily extended. You can draw geometrical shapes on your charts or plot programmable indicators from your data. It is also possible to filter or merge data. I got... -
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PyMapStitcher-3---Cuda-Maps-Downloader
A low ram maps downloader to keep your ram free.
PyMapStitcher 3 is a desktop application for downloading, stitching, and exporting very large satellite map areas as GeoTIFF/BigTIFF files. The software supports GPU acceleration with NVIDIA CUDA and CuPy, direct GeoTIFF georeferencing, WebView-based map selection, and high-performance tile processing for large-scale mapping workflows. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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QMCF2
Quantum Mechanical Charge Field - Molecular Dynamics
QMCF2 is a molecular-simulation package for molecular dynamics, Monte Carlo, geometry optimization, molecular mechanics, and combined quantum-mechanical/molecular-mechanical calculations. The source includes force-field, electrostatics, constraints, thermostats, pressure control, water models, QMCF/QM-MM, external-QM interfaces, conversion tools, and analysis utilities. Interfaces are available for xTB, DFTB+, Gaussian, Turbomole, CRYSTAL, and ASE-based workflows. External programs must... -
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MetRFinder
Detection of Heavy Metal Resistance Genes from Bacterial Proteomes
MetRFinder is a standalone GUI-based bioinformatics tool developed in Python for rapid identification of heavy metal resistance genes from bacterial proteomes. The software integrates DIAMOND BLASTP with BacMet Experimental and BacMet Predicted databases to enable high-throughput screening of protein FASTA files. Users can analyze single or multiple bacterial isolates through an intuitive graphical interface without requiring command-line expertise. -
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GromacsProSuite
Graphical User Interface for Gromacs
This tool is an integrated graphical interface that simplifies molecular dynamics simulations using Gromacs. It provides a structured, tab-based environment to set up, execute, and analyze simulations data without complex command-line operations. The software automates tasks such as topology generation, solvation, ion addition, minimization, equilibration, and production runs while executing GROMACS commands in the background. Built-in monitoring tracks CPU, RAM, and disk usage to ensure... -
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Gemi
PCR primers / probes design from multiple & degenerate sequences
Gemi, an automated, fast, and easy-to-use bioinformatics tool with a user-friendly interface to design primers and probes for polymerase chain reaction (PCR). Gemi accepts multiple aligned and long DNA and RNA sequences with degenerate nucleotide (non-A/C/G/T bases). Gemi can be used for quantitative, real-time and conventional PCR (qPCR, rt-PCR, etc.), and Sanger sequencing. Gemi can parse large dataset of sequences efficiently. Python source code is available upon request. Milestone:... -
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Croizat
A software package for quantitative analysis in Panbiogeography
Croizat is a free, user-friendly, cross-platform desktop software package which biologists can use to integrate and analyze spatial data on species or other taxa and to explore geographical patterns in diversity under a panbiogeographic and graph-theoretic approach. -
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Gem Measure
Live gemstone symmetry & distortion measurement
Gem Measure overlays an adjustable polygon onto a gemstone image or video feed and instantly calculates edge length deviations, symmetry, and overall quality. It's designed for jewelers, gemologists, and hobbyists who need quick, accurate measurements without expensive software. Works with USB microscopes, webcams, or any image file. How to Use Open an image (F) or connect a camera (C). Adjust the polygon by dragging its vertices to match the gem outline. Read deviation... -
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InspectionPro X
Professional desktop tool for managing industrial inspection reports
InspectionProX is a standalone desktop app for managing industrial inspection reports. No Python or extra software needed — just run InspectionPro.exe on Windows. Key Features: Secure role-based login (Admin, Editor, Viewer) Reports table with filters (Discipline, Area, Tag, Result) Easy report creation/editing form CSV/Excel import & export with progress Charts dashboard for result analysis User management & custom headers Database switch, backup, publish Clickable links & color-coded results Perfect for oil & gas, petrochemical, construction industries. ... -
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Sorting-Visualizer
A GUI sorting visualizer desktop application
A GUI sorting visualizer desktop application that helps to visualize various sorting algorithms interactively. Visualizer the sorting algorithms like Bubble sort, Insertion sort, Selection sort, Gnome sort, Shaker sort and Odd even sort. Change the bar color and background by customizing. Increase or decrease speed of animation to visualize the sorting process. Download now! -
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protoFramework
A Dassault Aviation project to simplify the building of prototypes
protoFramework is a Dassault Aviation software based on a Java library and other modules as described below, and on specific software developed and maintained by Dassault Aviation. This protoFramework aims to simplify the development of prototypes of any types in several languages or technologies (such as Java, C++/C, Groovy, Python, etc..). protoFramework is based on a concept of service-oriented architecture design (“SOA”), which permits the interconnexion of application components through services, using an application protocol managed by the protoFramework. -
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GrainSizeTools script
A Python script for estimating the grain size from thin sections
...For users with coding skills, the script is organized in a modular way facilitating the reuse and code extension. Lopez-Sanchez, MA (2018). GrainSizeTools: a Python script for grain size analysis and paleopiezometry based on grain size. Journal of Open Source Software, 3(30), 863, https://doi.org/10.21105/joss.00863 -
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bidict
The bidirectional mapping library for Python
Depended on by Google, Venmo, CERN, Baidu, Tencent, and teams across the world since 2009. Familiar, Pythonic APIs that are carefully designed for safety, simplicity, flexibility, and ergonomics. Lightweight, with no runtime dependencies outside Python's standard library. Implemented in concise, well-factored, fully type-hinted Python code that is optimized for running efficiently as well as for long-term maintenance and stability. Extensively documented. 100% test coverage running... -
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TorchQuantum
A PyTorch-based framework for Quantum Classical Simulation
A PyTorch-based framework for Quantum Classical Simulation, Quantum Machine Learning, Quantum Neural Networks, Parameterized Quantum Circuits with support for easy deployments on real quantum computers. Researchers on quantum algorithm design, parameterized quantum circuit training, quantum optimal control, quantum machine learning, and quantum neural networks. Dynamic computation graph, automatic gradient computation, fast GPU support, batch model terrorized processing. -
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CAMPARI
Software for molecular simulations and trajectory analysis
We are proud to introduce version 5 of CAMPARI. We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and... -
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Raspberry_Quemu_forWindows
This is QEMU virtual machine with Raspbian OS for students KNUCA
Це віртуальна машина QEMU із зібраною операційною системою Raspbian для емуляції Raspberry Pi на Windows 7, 8, 10. Використовується для занять з робототехніки в Київському національному університеті будівництва і архітектури. pi/raspberry -
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GrowthRates
Calculate growth rates from microplate reader output
The Bellingham Research Institute (BRI) develops and distributes software that is free of charge to academic and other non-profit organizations. GrowthRates is our software tool that simplifies the analysis of microplate reader output from microbial growth experiments without having to program in Python, R, or MATLAB. It automates the calculation of growth rate parameters, including rates, lag times, maximum population density. -
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Funi
Python script for calculation of deflection of elastic ropes.
...The solution is found by iteration, by mean of Scipy Minimize functions of Python, version 1.10. The results may be exported to .csv or .txt files. Gui is provided with tkinter windows. -
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SENAITE
SENAITE - professional, open source LIMS/LIS software
SENAITE provides professional open source laboratory software for enterprise environments, especially focused to behave with high speed, excellent performance and good stability. -
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MaxFEM
Software for electromagnetic simulation
MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. Since version 0.4.0, MaxFEM requires Python 3. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them. -
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...It has been developed in Python with a user-friendly interface for healthcare personnel. Thanks to Artificial Intelligence and deep learning methods, MELAGE has tools to estimate volumes of different regions of interest in both images. Moreover, it allows to perform linear, area and volumetric measurements in a very intuitive and easy way, being able to instantly see the segmented region in a new tab.
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Python Laboratory Operations Toolkit
many useful snippets for using python in a laboratory
A toolkit of Python software useful in a laboratory data acquisition and analysis environment. Includes support for such protocols as VXI-11 (and its extension, LXI), Vernier LabPro (now very old), and National Instruments DSTP (now very old). Also includes data analysis and modelling tidbits. Python3 updates are on the way in the very near future for the biggest packages. the vxi11 package is fully up-to-date, although see the blog post about python 3.13 -
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ED Software project contains several programs used (mostly) for processing gas-phase electron diffraction (GED) experimental data.
