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  • 1

    MToolBox

    A bioinformatics pipeline to analyze mtDNA from NGS data

    ...MToolBox provides also a Variant Call Format file (version 4.0) featuring, for the first time, allele-specific heteroplasmy. Please, check out the most recent updates of the source code with the Github repository of MToolBox: https://github.com/mitoNGS/MToolBox or visit the Web version of MToolBox @ MSeqDR: https://mseqdr.org/mtoolbox.php
    Downloads: 2 This Week
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  • 2
    Jacksum

    Jacksum

    a free cross platform checksum utility, supports 58+ hash algorithms

    Development of this project has been moved to https://github.com/jonelo/jacksum. This site has been left for historical purposes ONLY, you find older Jacksum versions here. Please visit the GitHub site for current development. Jacksum 1.7.0 is a platform independent checksum utility (written entirely in Java) for computing and verifying (integrity check) checksums, CRC and hashes (fingerprints). It supports 58 popular hash algorithms and a lot of unique features.
    Downloads: 21 This Week
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  • 3
    This project has moved to GitHub: https://github.com/emmawahl/facepai
    Downloads: 0 This Week
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  • 4
    SPANDx

    SPANDx

    Comparative analysis of haploid next-generation genome sequence data

    ...SPANDx can utilise PBS, SGE or SLURM for resource management. SPANDx can also run directly on the command line if no resource manager is available. For the most up-to-date version of SPANDx, check us out on GitHub: https://github.com/dsarov/SPANDx
    Downloads: 0 This Week
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  • 5
    polypy
    **(9 march 2016) this project is continued on github : http://jaapkroe.github.io/polypy ** Python script to analyze (shortest-path) rings in structures read from xyz-files. It can be useful for example to identify defects in crystal structures or molecules.
    Downloads: 0 This Week
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  • 6
    Ymap - Yeast Mapping Analysis Pipeline

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of heterozygosity (LOH) events in Candida albicans, the most common human fungal pathogen, we developed a pipeline for analyzing diverse genome-scale datasets from microarray, deep sequencing, and restriction site associated DNA sequence experiments for clinical and laboratory strains. ...
    Downloads: 0 This Week
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  • 7

    ANTS on CONDOR

    Using buildtemplateparallel.sh from ANTS on Condor

    *** NOTE: Any further updates or debugging will be made through github. Please go to: https://github.com/solleo/ANTs-Condor - SG (2014-07-22) Advanced Normalization Tools (ANTS; https://sourceforge.net/projects/advants/) is an extremely sophisticated image registration tool, which is often used in human neuroimaging analysis. As creating an unbiased study-specific template with a large number of subjects is highly demanding in computational load, parallelization is implemented in ANTS's script "buildtemplateparallel.sh" for SGE, PBS and Apple XGrid, but not for Condor yet. ...
    Downloads: 0 This Week
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  • 8
    DOMjudge programming contest jury system

    DOMjudge programming contest jury system

    DOMjudge is an automated judge system for programming contests.

    NOTE: DOMjudge has moved to www.domjudge.org and Github for all development. DOMjudge is an automated judge system to run programming contests. Both team and jury side interfaces are web based, with a command line submit tool available as well. It is written in PHP, shell-script and C/C++ and needs MySQL and a webserver.
    Downloads: 0 This Week
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  • 9
    Development and support of OCFA have been discontinued. the code has moved to these github repositories: https://github.com/DNPA/OcfaLib https://github.com/DNPA/OcfaArch https://github.com/DNPA/OcfaJavaLib https://github.com/DNPA/OcfaModules https://github.com/DNPA/OcfaDoc If you are interested in contributing to ongoing work on the creation of a community maintained OCFA inspired computer forensic framework, please join the Mattock/MattockFS community page on G+: https://plus.google.com/communities/102487198908055860744
    Downloads: 0 This Week
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  • 10

    es-ve

    Diccionarios en Español para Venezuela

    Migrado a GithUB EN: https://github.com/christiangda/es-ve La mejor opción para verificar y corregir la gramática de tus documentos de LibreOffice escritos en español. La extensión incluye: Corrector Ortográfico, Tesauro de Sinónimos y Separación Silábica. ¡Hecho en Venezuela! Sus principales características son: Más DE 87.000 lemas y sus respectivas conjugaciones.
    Downloads: 0 This Week
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