Search Results for "linux command line"
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Showing 37 open source projects for "linux command line"
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Maxima -- GPL CAS based on DOE-MACSYMA
Computer Algebra System written in Common Lisp
Maxima is a computer algebra system comparable to commercial systems like Mathematica and Maple. It emphasizes symbolic mathematical computation: algebra, trigonometry, calculus, and much more. For example, Maxima solves x^2-r*x-s^2-r*s=0 giving the symbolic results [x=r+s, x=-s]. Maxima can calculate with exact integers and fractions, native floating-point and high-precision big floats. Maxima has user-friendly front-ends, an on-line manual, plotting commands, and numerical libraries. Users... -
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ECTk
ECTk - The electrochemical tool kit
ECTk, the electrochemical tool kit, is a command line based application built on Tcl. It allows to define electrochemical experiments either interactively or via a script file sourced by ECTk. Virtually any potensiostat can be driven, the only condition being that the instrument has analogue inputs and outputs. ECTk is developed and maintained by the Electrocatalytic Green Engineering Group at Concordia University. ECTk communicates via any analogue IO board supported by the comedi library... -
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HMD Mathematics
Numerical mathematics platform, Matlab alternative
Matlab alternative. Scilab alternative. GNU Octave alternative. Mathematics software for numerical computation. Ordinary differential equations solver and finite elements solver. It has a console script interpreter, as well as a graphical interface script interpreter, for entering equations and statements, and a line plot display. -
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BRL-CAD
Open Source Solid Modeling CAD
BRL-CAD is a powerful cross-platform constructive solid geometry solid modeling system that includes an interactive geometry editor, ray-tracing for rendering & geometric analyses, network distributed framebuffer support, image & signal-processing tools. -
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OzGIS free open-source mapping system
Analysis and display of Census, business, government attribute data
OzGIS is an extensive mapping system for the analysis and display of geographically referenced data. Map data are downloaded from Census bureaux and map agencies or extracted from your own databases. The system can be used to to support management decisions associated with, for example, government planning, marketing, sales, site and personnel location, advertising and research. Systems for Windows, Mac and Ubuntu, source code, sample data files and manuals are included. DOWNLOAD to your... -
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owfs and owhttpd
Project moved to https://github.com/owfs/owfs/
Please note that OWFS source code, and all Issue/Tickets/merge requests have now been moved to https://github.com/owfs/owfs/. Developer mailing lists will still be kept at Sourceforge. ---- OWFS -- 1-Wire file system. Use the Dallas 1-Wire and iButton chips with standard filesystem commands. Create temperature loggers. Monitor everything. OWHTTPD -- same system, only used as a light weight web server. OWFS is also ported to embedded routers, Mac OSX and Windows. Basically you can use these... -
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Genomecomb is a package for the analysis of complete genome data. It can be used to compare, annotate and especially filter the results of complete genome sequencing.
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MEMBPLUGIN
MEMBPLUGIN: studying membrane complexity in VMD
MEMBPLUGIN is a membrane analysis tool for molecular-dynamics simulations. It is a collection of visual and command-line tools that can be run within the Visual Molecular Dynamics (VMD) environment to analyze biomolecular simulations of lipid bilayers. -
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aGPIB-tcl
'Asynchronous General Purpose Interface Buss' for Tcl
This extension adds a new channel type to Tool Command Language that allows for easy and modern communication with devices plugged into a GPIB buss. Linux and Windows friendly. -
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gpsman
GPS Manager (GPSMan): a manager of GPS data
GPS Manager (GPSMan) is a graphical manager of GPS data that makes possible the preparation, inspection and edition of GPS data in a friendly environment. GPSMan can also be used in command mode (with no graphical interface) -
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Description: PseAAC-Builder is a cross-platform stand-alone program for generating protein pseudo-amino acid compositions. This is a bioinformatics program. It performs faster than the existing PseAAC server. Reference: [1] Pufeng Du, Shuwang Gu, Yasen Jiao. PseAAC-General: Fast Building Various Modes of General Form of Chou’s Pseudo-Amino Acid Composition for Large-Scale Protein Datasets. International Journal of Molecular Sciences 15 (2014) pp.3495-3506 [2] Pufeng Du, Xin Wang, Chao Xu,...
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WISP
Weighted Implementation of Suboptimal Paths (WISP)
UPDATE: LATEST VERSION AT http://git.durrantlab.com//jdurrant/wisp Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. Traditionally, computational efforts have focused on the most optimal path of... -
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surfit is an open source and free gridding and contouring software. surfit can do interpolation/approximation of points, contours and surfaces, can take fault lines and trend surfaces into account, can use inequalities and other conditions. Supports a lo
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ASCEND is a modelling environment and solver for large or small systems of non-linear equations, for use in engineering, thermodynamics, chemistry, physics, mathematics and biology. Solvers for both steady and dynamic (NLA & DAE) problems, are provid
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NaRIBaS
Unix-based preparation and analysis toolbox for molecular simulations
Unix-based preparation and analysis toolbox for Nanomaterials and Room Temperature Ionic Liquids in Bulk and Slab using bash scripts, Gromacs tools and Matlab functions. NaRIBaS provides a framework that decouples user input parameter and terminal based command lines. NaRIBaS does not replace a simulation software and specific analysis tools like Gromacs, but it allows iterative repetition of tasks while changing specific input parameter. The toolbox is to be understood as a scripting... -
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Tcl binding to levmar library implementing Levenberg-Marquardt optimization algorithm often used in data fitting. Levmartcl is a standard Tcl extension providing command interface to levmar functionality. This library is only a wrapper of <levmar> which actually performs the work. See the <levmar> home site for details: http://www.ics.forth.gr/~lourakis/levmar/
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CDNSimulator provides several libraries for ns2 simulator to extend it with content delivery networks (CDN).
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Bras is a rules-based command execution system, ala 'make'. It includes a powerful rules system supporting foreign directory triggers, multiple rule types, and on-the-fly dependency generation. It is written in Tcl and uses Tcl as its script language.
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Ns is a discrete event simulator targeted at networking research. Ns provides substantial support for simulation of TCP, routing, and multicast protocols over wired and wireless (local and satellite) networks.
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Parsers for biological data based on scanner generators like Flex (C), Re2c(C), Jflex (Java) and Ifickle (Tcl). This scanner generators are providing easier maintainance, development and higher speed than hand written scanners. Scanner output is SQL.
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Refactored BLT Components (RBC), includes data vectors and graph widgets for developing line and bar graph applications in Tcl/Tk.
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Covered is a Verilog code coverage utility using VCD/LXT/FST dumpfiles (or VPI interface) and the design to generate line, toggle, memory, combinational logic, FSM state/arc and assertion coverage report metrics viewable via GUI or ASCII format. This project is ported to github and can be found at: https://github.com/chiphackers/covered
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A library to process X-ray images from the Heimann imaging system. The XGray library has interfaces to C++ and Tcl and includes the graphical program XRayLab, which is written Tcl.
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SIGPROC - a collection of signal processing programs developed for pulsar data reduction has been developed and maintained since 1999. The package is used to search for and visualize the presence of pulsed signals in noisy radio astronomy data.
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Automatic generation of documentation on Delphi projects from source code. Distinctive features are exact parsing gathering lots of information and a division of the parser and configurable generators (HTML, Win- & HTML-Help, PDF, LaTeX, XMI export)