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A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
Ruby computational geometry library. Shape/Line/Point classes, methods to test shape intersection (using ray-casting algorithm); includes XML parsing script (& sample xml file) to test intersection of shapes documented as ordinal point set in xml.
ChronoSVG generates a timing diagram, as used in electrical devices documentations, from a simple and intuitive ASCII source file. The output file is in SVG format, and makes use of CSS to defer the styling details to presentation time.
Remote monitoring and controll system for home use. Main goal is to create multilayer software for collecting data (weather data, measured data), gain remote access via web page, and controll some aspects like heating and lighting. https://flattr.com
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An application built onto the Open Table Explorer engine for the acquisition and analysis of home energy consumption and solar energy production.Moved to github as Open Table Explorer
rSIGNAL - ruby Simple Inter-Interface Generic Aggregation Layer. It allows external data sources to be aggregated, store the aggregated data and print the aggregated data out in a transformed format to a file (or integrated HTTP server) on demand.
Ruby Research Wiki (RRiki) can be used to keep notes and organize references for research. It uses a browser interface, an intuitive plain text formatting language (markdown), and facilities to cross-reference and hierarchically organize notes
PORIS toolkit allows describing graph-based systems and their behavior in a snapshot. It provides a web
editor for a domain visual specific language (DSL) and transformation tools to generate software prototypes, system configurations, ...
Video processing and computer vision library for GNU/Linux offering interfaces to do image- and video-I/O with ImageMagick/Magick++, Xine, firewire digital camera (DC1394), and video for linux (V4L2).
Note that this version of HornetsEye is deprecated. HornetsEye now is released as multiple packages on RubyGems.org. The source code is available on Github.com (see https://wedesoft.github.io/hornetseye-doc/ for more information).
LabDiary is a program for managing laboratory experiments in a sophisticated way. It is very easy to use - you can link experiments logically with each other, associate files to an experiment and structure all your data.