Showing 384 open source projects for "website using python"

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  • 1

    Genomic Binding Sites Analyser (BiSA)

    Genomic Region Archiving and Binding Sites Analysis (BiSA)

    BiSA is a bioinformatics database resource that allows investigators to run a number of overlapping genomic region analyses using their own datasets, or against the pre-loaded Knowledge Base. Analysis results can be restricted to a chromosome; the minimum base pair overlap in two sets or maximum distance between regions can be set; as can the maximum allowed distance between region centres. BiSA is capable of reporting overlapping regions that share common base pairs; regions that are...
    Downloads: 0 This Week
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  • 2
    Easy Equations

    Easy Equations

    Hand Written Equation Creator

    Easy Equations is a utility using which one can write the mathematical equations. The focus of this utility is to provide user friendly access to write mathematical equations which is helpful for students, lecturers, mathematicians and Research persons who prefer using mathematical equations in a document, PowerPoint or web sites. Works on Windows as well as Linux platforms.
    Downloads: 1 This Week
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  • 3
    This project develops a simple, fast and easy to use Python graph library using NumPy, Scipy and PySparse.
    Downloads: 0 This Week
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  • 4
    The Generic Graphics Toolkit is a library of generic programming primitives that allow applications to be written that adapt to whatever underlying graphics system the developer is using.
    Downloads: 20 This Week
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  • 5

    BriCS

    SaaS for running simulation models in the cloud

    The Bristol Cloud Service simulation runner is a cloud computing Software as a Service designed to enable users to quickly launch simulation code on Amazon AWS' Elastic Compute Cloud (EC2). BRiCS is written in Python using the Django framework and interacts with EC2 using the boto API. BriCS enables multiple simulation runs to be launched in parallel from a web browser. Model configuration (parameters) files are uploaded via the browser and results files are downloadable on completion. BriCS enables researchers with software simulation models to access the rapid scale out opportunities of the cloud. ...
    Downloads: 0 This Week
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  • 6

    srst

    Short Read Sequence Typing

    Update - SRST2 Now Available ------ 25 Sep, 2013 This project has now been replaced by SRST2 - Short Read Sequence Typing for Bacterial Pathogens, available at http://katholt.github.io/srst2/ The new SRST2 program does gene typing as well as MLST (e.g. typing resistance genes, virulence genes, etc). SRST2 is faster and more accurate than the old SRST, using bowtie2 to achieve local alignments (no need for flanking sequences) and a brand new scoring system.
    Downloads: 0 This Week
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  • 7

    Schlangenaufbewahrungsbehälter

    A Deliberately Non-Object-Oriented Python Interface to COMEDI

    aka: Schlang - A Deliberately Non-Object-Oriented Python Interface to COMEDI COMEDI datatypes and functions are replicated though this interface using the Python ctypes library. This allows the user to interface directly with comedi-lib though the comfortable interface of a Python interpreter.Object-Orientation of the interface is deliberately not provided so the coding style will loosely mimic C -- in this way, Schlang can be used to prototype and debug complex programs that will later be written in C.
    Downloads: 0 This Week
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  • 8
    DeDAY

    DeDAY

    MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.

    DeDAY (Demography Data Analyses) is a tool of analyzing demography data. It supports Gompertz, Weibull and Logistic distributions. DeDay also supports mixed mortality models based on these distribution such as the Gompertz-Makeham distribution. Distributions such as Gompertz describes only age-dependent mortality, which increases over time. Mixed mortality models, such as in Gompertz-Makeham distribution, consider a more general case where mortality is consist of both age-dependent and...
    Downloads: 0 This Week
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  • 9
    This is the former home of pyecm, which has now been moved to github: https://github.com/martingkelly/pyecm Pyecm factors large integers (up to 50 digits) using the Elliptic Curve Method (ECM), a fast factoring algorithm.
    Downloads: 0 This Week
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  • 10
    Voice keyboard/dictation. Aims to be a total substitute for a keyboard. Spell out words letter by letter (using code: alpha, bravo, ..). Arrow keys, modifiers work. Speak whole words (but whole word accuracy is not good). Attach commands to some word
    Downloads: 4 This Week
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  • 11

    Tuque

    Tools for mapping RNA-Seq reads to eukaryotic genomes

    Tuque includes 4 programs: tuqueIndex to prepare Bowtie indexes that include spliced sequences tuqueMap to map reads using the prepared indices tuqueSplice to find splice junctions from the reads tuqueCount to count the reads mapping within annotated sequence intervals
    Downloads: 0 This Week
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  • 12

    X-Freq

    X-Ray Reflectivity Frequency Analysis

    Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques.
    Downloads: 0 This Week
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  • 13

    Webapp

    A web interface to the SnowyOwl gene prediction pipeline

    Downloads: 0 This Week
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  • 14

    RASPnmr

    Protein NMR backbone resonance assignment

    RASP uses structure-based chemical shift predictions to solve the backbone resonance assignment problem in protein NMR spectroscopy. This enables rapid determination of highly accurate assignments on the basis of minimal experimental datasets, even for spectroscopically challenging proteins. RASP takes as input spin systems assembled on the basis of an arbitrary set of conventional triple-resonance NMR experiments. Uniquely, RASP is capable of extensive assignments even in the abscence of...
    Downloads: 0 This Week
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  • 15
    SDEdumper

    SDEdumper

    Copy multiples feature classes in ArcSDE to a local file geodatabase

    Why use it? You can create your own Python script using model builder, but you have to modify the script everytime you want to dump different tables. Using this script you only need to have a CSV with all the table names, that’s it. Purpose: It can be used as an archival and historical database It will make you ArcSDE database portable and shareable
    Downloads: 0 This Week
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  • 16

    Planets

    A program for approximate simulation of planetary systems

    With Planets you can create and simulate planetary systems on your computer using Newton's law of universal gravitation. This program can be used in schools for illustration and students can experiment with it themselves. I created this project as part of the German Abitur exam, which is why the help documents are currently only available in German. Requirements: - Python 2.7 - Windows 7, Windows XP, Ubuntu Other operating systems may work but were not tested.
    Downloads: 1 This Week
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  • 17
    Rospo GeoTech

    Rospo GeoTech

    Tool-Kit aplication for system Geo Integrations

    Project created to develop customizations in OpenGeo, to contribute to the standardization of formats Brazilians. Tool-Kit aplication for system Geo Integrations, using java frameworks.
    Downloads: 0 This Week
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  • 18
    slumo

    slumo

    Software and Library for USB2AD device

    SLUMO is a software and library for USB2AD module. Project has two parts. The first is stand alone measurement software with GUI using GTK3+ and python 3. The second is a library that handle all comunication with device, so you can create your own scripts for custom measuring in a very easy way.
    Downloads: 0 This Week
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  • 19

    AMBIENT

    Find active modules in metabolic networks using high-throughput data

    IMPORTANT: Since publication of the AMBIENT method in BMC Sys Bio, several updates have been made. If you wish to use the version used in the paper it is v0.6.3, however I recommend using the latest version which works in the same way but with additional options and has stability and performance improvements. Thanks for your interest! AMBIENT (Active Modules for Bipartite Networks) is a Python module that uses simulated annealing to find areas of a metabolic network (modules) that have some consistent characteristic. ...
    Downloads: 0 This Week
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  • 20

    ARDEN

    Specificity Control for Read Alignments Using an Artificial Reference

    We introduce ARDEN (Artificial Reference Driven Estimation of false positives in NGS data), a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.
    Downloads: 0 This Week
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  • 21
    Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no
    Downloads: 0 This Week
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  • 22
    Black Spot Leaf Area Calculator

    Black Spot Leaf Area Calculator

    Automated leaf area estimation from scanned leaf images

    Black Spot is a free stand alone software and method to estimate leaf area from images of leaves captured using standard flatbed scanners. This easy to use software allows the user to batch process a large number of samples from multiple species with minimal user input.
    Downloads: 2 This Week
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  • 23
    This ROS (Robot Operating System) repository contains the ROS packages for using ROS with the Webots mobile robot simulation software.
    Downloads: 0 This Week
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  • 24

    android-python2.7.3

    Python2.7.3 for android

    This is python2.7.3 which can be compiled using android-ndk By using python ,Its is possible to run lot of great application in android phone. At the time of writing I could run IPython, Isympy, Django etc on my android phone. This project only considering command-line binary builds. Not any GUI apps.
    Downloads: 0 This Week
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  • 25
    pyTectonics

    pyTectonics

    3d plate tectonics in Python

    PyTectonics is no longer maintained. There is a replacement, which you can see here: davidson16807.github.io/tectonics.js.
    Downloads: 1 This Week
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