Search Results for "code" - Page 8
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Showing 263 open source projects for "code"
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Atlas2Cloud
Atlas2 Genome Analysis Pipeline on Amazon Web Services
This is the backend source code of the Atlas2-Cloud pipeline on Amazon which starts and terminates worker nodes, runs analysis and monitors worker instances. It is PRIMARILY meant to be used through Amazon Web Services (AWS) management console by looking for the public Atlas2-Cloud machine image. Alternatively, the code can also be used for running the pipeline from your computer. -
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Lightning Planning Framework for ROS
ROS package implementing the Lightning Framework using OMPL
...This package uses OMPL planners (http://ompl.kavrakilab.org/) to implement each component in lightning and can be called the same way as any other OMPL planner. The code was developed at UC Berkeley by Cameron Lee and Dmitry Berenson under the supervision of Prof. Pieter Abbeel and Prof. Ken Goldberg. Please see the Wiki for instructions on how to install and use lightning: https://sourceforge.net/p/lightningros/wiki/Home/ -
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niftilib
** MAIN SITE IS NOW: https://github.com/NIFTI-Imaging/nifti_clib **
niftilib is a collection of i/o routines for the nifti1 neuroimage data format. C (nifticlib), Java (niftijlib), Matlab (niftimatlib), and Python (pynifti) code is available. For nifti format info see: http://nifti.nimh.nih.gov/ -
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3D tracking using wiimote
3D tracking of 4 IR LEDs using 2 wiimotes and python
...The mini project involves the control of an articulated robotic arm which resembles a human arm. The control is done via tele-manipulation which is done by the tracking of 4 IR LEDs fixed at the joints of the controller arm. This code is the part of the project responsible for the interfacing with the wiimote, stereo-triangulation of the wiimote data and determining the 3D coordinates of the IR LEDs. -
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mlpy
Machine Learning Python
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL. mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3. mlpy is available both for Python >=2.6 and Python 3.X. -
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Open Metaheuristic (oMetah) is a library aimed at the conception and the rigourous testing of metaheuristics (i.e. genetic algorithms, simulated annealing, ...). The code design is separated in components : algorithms, problems and a test report generator
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rp6simul
rp6simul is a simulator for the RP6 robot (AREXX Engineering)
...Furthermore, a simple 2d environment can easily be created to test lighting, collision, motor speeds and so on. The simulator does not run native AVR files, but instead a thin wrapper is provided so that the AVR code can be compiled natively. Thanks to this wrapper, and a flexible Lua driver interface, the simulator emulates most of the IO registers, requiring no or minimal code modifications. rp6simul is primarily developed on Linux, but a Windows version will also be released. -
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Clinical Evidence Detector
Detector of clinical evidence
This is a Python program based on the NegEx algorithm that detects the polarity of the clinical evidence in clinical random trials. If you use this code please cite this paper: P. Davis-Desmond and Diego Mollá. Detection of Evidence in Clinical Research Papers (2012). Australasian Workshop On Health Informatics and Knowledge Management (HIKM 2012), Melbourne, Australia. http://www.ics.mq.edu.au/~diego/publications/hikm12.pdf -
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Modelio-Open is a project hosting a set of open source extensions (SoaML, SysML and UML Testing Profile) for a previous version (1.2) of the Modelio Free tool . Currently, the lastest version (2.x) of Modelio modeling and generation tool is available at http://modelio.org/downloads/download-modelio.html. All extensions are downloadable at http://forge.modelio.org/projects.
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Next-Gen Encryption for Post-Quantum Security | CLEAR by Quantum KnightCLEAR by Quantum Knight is a FIPS-140-3 validated encryption SDK engineered for enterprises requiring top-tier security. Offering robust post-quantum cryptography, CLEAR secures files, streaming media, databases, and networks with ease across over 30 modern platforms. Its compact design, smaller than a single smartphone image, ensures maximum efficiency and low energy consumption.
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Simple python code that produces color-coded quality plots based on fastq format read quality scores. Scores are averaged over binned read tile coordinates. Useful for spotting spatial quality patterns.
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WARNING! HPGL source code (NOT the releases, they are still here) now moved to the GitHub at https://github.com/hpgl/hpgl. Please, update your bookmarks!
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HPC cloud computing for OpenFOAM (R) users
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QuickFlash is a C++-based analysis library for data files generated by the Flash hydrodynamics code. It provides high-performance access to large datasets in low memory situations and other restrictive environments.
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NOTE: We have moved to bitbucket, the code here is not maintained anymore https://bitbucket.org/makokal/openprm/overview
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MIPGen
Simple Molecular Interaction Potential Generator in Python
Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome... -
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Project moved to https://codelv.com/projects/inkcut/ Code move to https://github.com/codelv/inkcut/ Forum moved to https://inkcut.org/
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The Protein Geometry Database hosts the development code for a flexible database for searching protein geometry, as well as a library for accessing this data for protein modeling & refinement programs.
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""" E-Cell's source code repository has moved to GitHub! https://github.com/ecell The development of E-Cell now continues on GitHub. The Subversion repository was abandoned. """ E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.
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Unique finds patterns in source code. It helps you build better software by finding pieces of code that could benefit from a refactoring.
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Methods and testing of methods for automatic analysis of in situ cyclic voltammetry data. This, at least initially, is the code from my masters thesis, which was done as a contribution to a larger project called Aevum. Aevum is being developed at t
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was moved to http://sourceforge.net/projects/cloudflu
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NOTE: We have moved the project to https://bitbucket.org/makokal/openprm/overview, all the code that is still in sf is not maintained anymore. please use the new code at the location given
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ein kleines Programm um bestehende CNC Programmteile zu modifizieren. z.b. invertieren einer CNC Achse oder das verschieben einer CNC Achse Manipulation CNC Programm snipe
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SynBioLib -- your toolkit for synthetic biology applications. SynBioLib aims to establish a platform on which the Synthetic Biology community can develop and share code that is common to many tasks and programs.
