Showing 685 open source projects for "alpha"

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  • 1

    PolyCTLDesigner

    Python scripts for designing polyepitope T-cell immunogens

    Given the peptides (T-cell epitopes) PolyCTLDesigner selects flanking sequences to optimize TAP-binding and joins resulting oligopeptides into a polyepitope in a way providing efficient liberation of potential epitopes by proteasomal and/or immunoproteasomal processing and minimizing the number of junctional epitopes. For constructing polyepitopes PolyCTLDesigner utilizes known amino acid patterns of proteasome cleavage and TAP-binding specificity. PolyCTLDesigner is also able to choose...
    Downloads: 0 This Week
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  • 2
    Voice keyboard/dictation. Aims to be a total substitute for a keyboard. Spell out words letter by letter (using code: alpha, bravo, ..). Arrow keys, modifiers work. Speak whole words (but whole word accuracy is not good). Attach commands to some word
    Downloads: 0 This Week
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  • 3
    ASCEND modelling environment
    ASCEND is a modelling environment and solver for large or small systems of non-linear equations, for use in engineering, thermodynamics, chemistry, physics, mathematics and biology. Solvers for both steady and dynamic (NLA & DAE) problems, are provid
    Downloads: 3 This Week
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  • 4
    Math tools in Python to tackle down problems in Operational Research fields. Comes with a Django based web interface to allow remote access to complex simulation means.
    Downloads: 0 This Week
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  • 5

    X-Freq

    X-Ray Reflectivity Frequency Analysis

    Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques.
    Downloads: 0 This Week
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  • 6
    AutoFlight

    AutoFlight

    AutoFlight is a powerful, open source AR.Drone control program.

    AutoFlight features AR.Drone control with a gamepad or joystick, sensor data logging, 3d mapping, Python scripting to automate the drone's behavior and Arduino extensions.
    Downloads: 0 This Week
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  • 7

    pyMdfParser

    Parser for measurement data in mdf format

    Python implementation of a mdf file reader Aim of the project is to implement a parser that can be used in Python based application which work on mdf data. MDF means Measure Data Format and is a binary format for measurement in the automaitve area
    Downloads: 0 This Week
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  • 8

    Unit Var

    Automatic Units and Scale calculation in Python

    Doing calculations in a programming language is done without the corresponding units. This is a source of programming mistakes. In the units and in the scale. This class try to solve this issue, buy instead of numbers use a class that contains both: The number in int,float and the units / reciprocate units. A conversion table is integrated, and preloaded with standard units. But you are not limited to those units. You can define the units you want. You can select between manual...
    Downloads: 0 This Week
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  • 9

    nwbas2ecce

    nwbas2ecce converts nwchem basis set files to the ECCE format

    The basis sets included with ECCE have -- as far as I can tell -- not been updated for many years. In addition, many of the newer basis sets that come with nwchem aren't included, such as the def2- series. nwbas2ecce is a python script that aims to automate as much as possible of the conversion process of a nwchem basis set file into the files necessary for ECCE to included it in the basis set tool. The process isn't completely automatic, but I also believe that it shouldn't be to...
    Downloads: 0 This Week
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  • 10
    Abandoned version of qbc. DOES NOT WORK properly
    Downloads: 0 This Week
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  • 11
    An active filter design assistant. Electrical engineers can use it to design and simulate analog active filters.
    Downloads: 0 This Week
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  • 12

    hrefinder

    Detection of homologous recombination events from SNP data

    This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of...
    Downloads: 0 This Week
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  • 13
    A collection of pure Python algorithms and data structures
    Downloads: 0 This Week
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  • 14
    Physical modelling of water transport in plants
    Downloads: 0 This Week
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  • 15
    RSAT

    RSAT

    A script to perform SAT attacks on RSA

    SAT solvers are being used more and more in partial key exposure attacks. The scope of this script is to show that SAT solvers can be used in partial key exposure attacks of RSA with very good results.
    Downloads: 0 This Week
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  • 16
    The Python Unified Membrane Analysis Toolkit is a suite of python tools for analyzing molecular dynamics simulations of membranes.
    Downloads: 0 This Week
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  • 17

    crosscenter

    Program to compute cross center

    Assisted program to compute the center of a cross in an image. It is based in python and opencv. Main target is massive data processing. Developed for my Ph.D.
    Downloads: 0 This Week
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  • 18
    A simple python script for aquarists that figures tank volume, salinity, converts temp & volume, and calculates substrates based on their specific gravity.
    Downloads: 0 This Week
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  • 19
    gbview
    is a interactive molecular visualisation program designed especially designed for coarse-grained simulation of non-spherical particles. Ellipsoids (Gay-Berne), disks, and custom shaped uniaxial particle (e.g. pear-shaped particles) can be represented.
    Downloads: 0 This Week
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  • 20
    ReadWrapper is a Python toolset to prepare and package raw sequencing data ("reads") for submission to the Sequence Read Archive (SRA, http://trace.ncbi.nlm.nih.gov/Traces/sra/).
    Downloads: 0 This Week
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  • 21

    CudlaBot

    Quadruped robot with simulator control software

    Downloads: 0 This Week
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  • 22

    Dvipdfm tool for SCons

    SCons tool to cooperate with dvipdfm program

    SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This is a SCons extension (tool) which enables usage of the dvipdfm program to convert dvi files to pdf.
    Downloads: 0 This Week
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  • 23
    GarlicSim is an ambitious open-source project that attempts to redefine the way that people think about computer simulations, making a new standard for how simulations are used. It is not hosted on SourceForge; Visit http://garlicsim.org to get it.
    Downloads: 0 This Week
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  • 24

    Vendettool

    This allows to program a path for your vex robot in the simplest way !

    Ce projet a pour but de faciliter la programmation de parcours pour robots vex avec des encoders. Il suffit de placer des point sur l'image, de définir une échelle et d'indiquer la distant qui sépare les roues motrices et le programme va générer un code RobotC que vous pourrez utiliser pour programmer votre robot ! Et il y a évidement pleins d'outils indispensables pour vous rendre la tâche plus facile ;). https://www.youtube.com/watch?feature=player_embedded&v=4U9jdZDquII
    Downloads: 0 This Week
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  • 25
    PyMbs has moved to Bitbucket: https://bitbucket.org/pymbs/pymbs PyMbs is a Python library for modelling holonomic multibody systems. It is able to generate simulation code for Python, Modelica and Matlab.
    Downloads: 0 This Week
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