Showing 171 open source projects for "python package"

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  • 1
    MyHDL is a Python package for using Python as a hardware description and verification language.
    Downloads: 2 This Week
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  • 2

    NetView P

    Population Genomics Network Analysis Pipeline

    NetView P has been re-structured as a package for R and moved to GitHub: https://github.com/esteinig/netview
    Downloads: 0 This Week
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  • 3
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 4

    PyBrella

    Python script to automate umbrella sampling with AMBER

    PyBrella is a script designed to automate the umbrella sampling process, using the AMBER molecular dynamics package.
    Downloads: 0 This Week
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  • 5

    UniPyRange

    Tool to fetch protein/DNA truncation constructs from Uniprot DB

    .... - Requires BioPython (3) and Bioservices Package (4) (1) The UniProt Consortium UniProt: a hub for protein information Nucleic Acids Res. 43: D204-D212 (2015). (2) RefSeq: an update on mammalian reference sequences. Nucleic Acids Res. 2014 Jan 1;42(1):D756-63. (3) Cock PJ et al. Bioinformatics (2009) (4) Cokelaer et al, Bioinformatics (2013)
    Downloads: 0 This Week
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  • 6

    ThermV

    Comprehensive thermal analysis software package

    ...The modules for peak deconvolution, peak profile analysis and determination of Ea and lnA will be provided first. Full GUI will be provided in beta stage. Due to computational limitations, the code is partly programmed in Python and partly in R. Python code will eventually be fully integrated into GUI. R code might remain standalone, although it will be integrated to a highest possible degree. Distributed under GPL
    Downloads: 0 This Week
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  • 7

    Aelius Brazilian Portuguese POS-Tagger

    Python, NLTK-based package for shallow parsing of Brazilian Portuguese

    Aelius is an ongoing open source project aiming at developing a suite of Python, NLTK-based modules and interfaces to external freely available tools for shallow parsing of Brazilian Portuguese. It also includes language resources such as language models, sample texts, and gold standards. Presently, Aelius already offers facilities for POS-tagging and chunking corpora and outputting annotations in different formats, such as in XML in the TEI P5 encoding scheme.
    Downloads: 0 This Week
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  • 8

    Latest on Arxiv

    Parse the latest Arxiv RSS stream and get your institute preprints

    ...Feel free to take and modify this code any way you want. But if you are using it, I'd love to at least here from you and know I didn't put this up for nothing. The program has no major prerequisites, except the Python package pyPdf. It is build for Python 2.6.x series, but will probably work on many others as well.
    Downloads: 0 This Week
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  • 9
    GSI Student ToolBox
    GSI student toolbox is a software package made for teaching purposes. It allows you to perform seismic inversion using global sthocastic inversion method made within CERENA/CMRP. NOTE: you can perform the same operations done with GSI Student Toolbox with our newest software GEOMS2. You can download the beta release here: https://sourceforge.net/projects/geoms2/
    Downloads: 0 This Week
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  • 10
    bladedesigner
    The BladeDesigner package is a CAD/CAE tool providing classes for turbomachine blade design. So far it is optimized to be useful in the aerodynamic design process. It comes with a GUI but is most powerful with user defined python scripts.
    Downloads: 0 This Week
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  • 11
    SalStat is a small application for statistical analysis emphasising the sciences and social sciences (particularly Psychology). The project is designed around the user interface which has been designed to be simple to use. Think SPSS, but better!
    Downloads: 0 This Week
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  • 12
    A package of programs for analysis of meiosis in yeast.
    Downloads: 0 This Week
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  • 13

    EducationalLCS

    eLCS - Educational Learning Classifier System

    Educational Learning Classifier System (eLCS) is a set of learning classifier system (LCS) educational demos designed to introduce students or researchers to the basics of a modern Michigan-style LCS algorithm. This eLCS package includes 5 different implementations of a basic LCS algorithm, as part of a 6 stage set of demos that will be paired with the first introductory LCS textbook. Each eLCS implementations (from demo 2 up to demo 6) progressively add major components of the entire...
    Downloads: 0 This Week
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  • 14
    calc2booktab.latex

    calc2booktab.latex

    Script for OpenOffice/LibreOffice to convert tables to Latex-Code

    ...The soruceforge page won't get any bugfixes, please use the github repo if you want to try this macro. -------------------------------------------------------------------------- A Python extension for OpenOffice/LibreOffice to convert selected cells to LaTeX-Code. Its similar to Calc2Latex, but typographic formatting is more advanced (numeric columns, dcolumn-package, booktab-package) Script is tested and working with... ... Ubuntu 12.04 64 bit / LibreOffice 3 ... Windows 7 64 bit / LibreOffice 3* ... Arch Linux 64 bit / LibreOffice 4.2 *Encoding problems with special characters (non-unicode) on Windows reported.
    Downloads: 0 This Week
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  • 15

    pymatlab

    A pythonic interface to MATLAB

    This package lets Python users interface and communicate with MATLAB from Python. Pymatlab makes it easier for users to integrate a project with a large MATLAB codebase into python scripts by using MATLAB scripts as a part of the python program. The basic functionality of this package is to send data from Python to MATLAB's workspace to be able to run Matlab function on the data. ...
    Downloads: 0 This Week
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  • 16
    ctqa-cp

    ctqa-cp

    Automatic analysis of CT images of the CatPhan600/504 phantom

    Hosted at google code, for latest version please go to: https://code.google.com/p/ctqa-cp/ Automatic image quality analysis of computed tomography images of the CatPhan? phantom. CTQA is a software package to aid in quality assurance of image quality for CT scanners. The software currently only supports analysis of CT-images of the CatPhan600? phantom. Other phantoms may be supported upon request. The purpose of CTQA-cp is twofold: 1) To handle and analyze image sets consisting of a few...
    Downloads: 1 This Week
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  • 17

    Galactus

    A neutral hydrogen galaxy modeling and fitting tool

    Galactus is a new astronomical modeling package. The aim is to model and fit datacubes from radio synthesis telescopes. Galactus is the only HI tool which can predict the HI (self-)absorption.
    Downloads: 0 This Week
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  • 18
    ADDA is a software package for finding domains in protein sequences. ADDA has moved to github (https://github.com/AndreasHeger/adda)
    Downloads: 0 This Week
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  • 19
    tigreBrowser is a web-based browser for ranking results from R/Bioconductor package tigre and similar tools. It allows easy viewing, sorting and filtering of visualisations of models produced by tigre.
    Downloads: 0 This Week
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  • 20

    MaryGold

    Variation analysis of metagenomic samples

    The package enables detection of sequence variation between metagenomic samples.
    Downloads: 0 This Week
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  • 21

    VisualRiSC

    Toolbox visualizing computations of Realizable Sign Conditions.

    ...VisualRiSC provides implementations of such notions and functions using the Python package SymPy, on the one hand, and an interface to Gnuplot in order for a visualization of examples using the Python package Gnuplot.py.
    Downloads: 0 This Week
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  • 22

    nevesim

    NEVESIM is an event-driven neural simulation tool.

    NEVESIM is a software package for event-driven simulation of networks of spiking neurons with a fast simulation core in C++, and a scripting user interface in the Python programming language. It supports simulation of heterogeneous networks with different types of neurons and synapses, and can be easily extended by the user with new neuron and synapse types.
    Downloads: 0 This Week
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  • 23
    GISBox by Citiviz

    GISBox by Citiviz

    Ready-to-use appliance for GIS, Data Mining and Analysis, Modelling...

    GISBox by Citiviz is a ready-to-use virtual appliance containing an assortment of powerful, free and open source GIS, Data Mining and Analysis, Modelling and Programming software and packages. The pre-configured and tested GISBox allows you to try and use in few minutes a variety of software used by data scientists, engineers, physicists, mathematicians, geomatics engineers, and geographers from around the globe, without installing anything more than once the Oracle VirtualBox™ software...
    Downloads: 1 This Week
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  • 24
    A Python package with bindings to the "Virtual Instrument Software Architecture" VISA library, in order to control measurement devices and test equipment via GPIB, RS232, or USB. Note: Development of PyVisa moved to github https://github.com/hgrecco/pyvisa This page is of historical interest only!
    Downloads: 0 This Week
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  • 25

    py-astro

    An astronomical library.

    Python package for calculation right ascension, declination, and distance for solar system planets.
    Downloads: 0 This Week
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