Showing 247 open source projects for "bns-tools"

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  • 1

    ParamIT

    a Toolset for Molecular Mechanical Force Field Parameterization

    ...The usage of these tools decreases the labor effort, lowers manual input errors and reduces the time needed for accurate MM parameterization efforts.
    Downloads: 0 This Week
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  • 2
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum...
    Downloads: 19 This Week
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  • 3
    LaueTools

    LaueTools

    open source python packages for X-ray MicroLaue Diffraction analysis

    LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools
    Downloads: 3 This Week
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  • 4
    pyGear

    pyGear

    Precise gear geometry generator for spur and helical gears

    ...It allows for the computation of dynamic properties and the creation of exact geometries from a minimal input set. PyGear can simulate the tool geometry and kinematics of standard gear hobbing tools to generate precise flank, tooth root and tip geometries.
    Downloads: 3 This Week
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  • 5
    zCharter
    Charting tools, backtesting tools, and data visualization tools for the most popular cryptocurrencies.
    Downloads: 0 This Week
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  • 6
    D-Tailor

    D-Tailor

    D-Tailor: automated analysis and design of DNA sequences

    ...DNA-Tailor (D-Tailor) is a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of sequence analysis tools into a Monte-Carlo algorithm that evolves synthetic sequences towards user-defined goals.
    Downloads: 0 This Week
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  • 7
    TEACUP

    TEACUP

    TCP Experiment Automation Controlled Using Python

    ...TEACUP also collects a variety of metadata from the end hosts and bottleneck router, such as the actual OS/kernel version(s) used. TEACUP also provides some simple tools for analysing the results of experiments, such as plotting a flow's experienced RTT over time.
    Downloads: 1 This Week
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  • 8

    Inelastica

    Transport code and tools based on SIESTA and TranSIESTA (DFT-NEGF)

    NOTE: The Inelastica project moved to https://github.com/tfrederiksen/inelastica/ in February 2018. Pre- and post-processing tools for SIESTA (DFT, quantum chemistry) and TranSIESTA (quantum transport): (1) Calculate phonon frequencies, e-ph couplings, and inelastic contributions to the conductance (IETS). (2) Access Hamiltonian etc from Python. Some code documentation and installation instructions are available at this mediawiki page: http://dipc.ehu.es/frederiksen/inelastica/index.php.
    Downloads: 0 This Week
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  • 9
    multiplierz
    Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats. For a copy of the source code, check out our Github repositories: mzDesktop: https://github.com/MaxAlex/mzDesktop multiplierz: https://github.com/MaxAlex/multiplierz
    Downloads: 6 This Week
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  • 10
    SciPy: Scientific Library for Python
    NOTE: the project has moved to https://scipy.org/scipylib/ --- go there to find latest versions. This sourceforge project contains only old historical versions of the software. SciPy is package of tools for science and engineering for Python. It includes modules for statistics, optimization, integration, linear algebra, Fourier transforms, signal and image processing, ODE solvers, and more.
    Downloads: 21 This Week
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  • 11

    Collaborative Computing Project for NMR

    Collaborative Computing Project for NMR (CCPN)

    The Collaborative Computational Project for NMR (CCPN) provides tools and knowledge to maximise the impact of the biological NMR studies. The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS.
    Downloads: 0 This Week
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  • 12
    PyCAM
    Open Source CAM - Toolpath Generation for 3-Axis CNC machining
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    Downloads: 63 This Week
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  • 13

    coizfm

    COI ZFM tools

    Tools for Medical Physics Department
    Downloads: 0 This Week
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  • 14

    SCons gnuplot tool

    SCons tool to cooperate with gnuplot program

    SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This package is an extension (tool) to SCons, which enables "compilation" of gnuplot scripts in SCons-based projects. The intended audience include (but is not limited to) authors/publishers...
    Downloads: 0 This Week
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  • 15

    Leave A Trace Tools

    Tools for reading the track data of the project "Leave a Trace"

    ...It is installed as a permanent exhibition within the Charité in Berlin, Germany. Please find more Details about LAT here: https://leave-a-trace.charite.de/action This sourceforge project provides python tools to read the raw XML data produced by LAT. The data reading module works with python2 and python3. LAT XML Data can be downloaded here: https://leave-a-trace.charite.de/action/xml_dateien_der_traces/ ## Visualization tool: This project also contains a GUI-based visualization tool, which allows creation of custom vector data (SVG) from the given LAT data. ...
    Downloads: 0 This Week
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  • 16
    Libre Mechanics

    Libre Mechanics

    Open Knowledge on engineering development.

    Libre Mechanics it’s an Open Knowledge project created to offer a useful platform of information related with the development and research of Mechanical Engineering themes and similar fields, higly related with the use of Open Source and Software Libre tools. Here you will find a wide variety of projects, publications and scientific material available as references for developing their own projects, also guides and tutorials that allow you to take advantage of free software tools available today. The four principal lines of work are: Design Analysis and Simulation Automation and Robotics Development
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    Downloads: 9 This Week
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  • 17

    P3BSseq

    Parallel processing pipeline for analysis of bisulfite sequencing data

    Bisulfite sequencing (BSseq) processing is among the most cumbersome next generation sequencing (NGS) applications. Though some BSseq processing tools are available, they are scattered, require puzzling parameters and are running-time and memory-usage demanding. We have developed P3BSseq, a parallel processing pipeline for fast, accurate and automatic analysis of BSseq reads that trims, aligns, annotates, records the intermediate results, performs bisulfite conversion quality assessment, generates BED methylome and report files following the NIH standards. ...
    Downloads: 0 This Week
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  • 18

    cphcttoolbox

    Cph CT Toolbox is a selection of Computed Tomography tools

    Copenhagen Computed Tomography Toolbox is a collection of applications and libraries for flexible and efficient CT reconstruction. The toolbox apps generally take a set of projections (X-ray intensity measurements) and filter and back project them in order to recreate the image or volume that the projections represent. The project includes both mostly informative CPU implementations and highly efficient GPU implementations. Regular releases are hosted at the Python Package Index.
    Downloads: 0 This Week
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  • 19

    AstroTortilla

    Astrophotography assistant

    AstroTortilla is a wrapper around common astrophotography tools intended to automate basic tasks such as polar alignment and goto correction. Not in active development presently.
    Downloads: 5 This Week
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  • 20

    BioC

    We describe a simple XML format to share text documents and annotation

    ...Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are interested in reuse, and we focus on common NLP tasks that are broadly useful for textmining.
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    Downloads: 7 This Week
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  • 21

    MerDAQ

    A DAQ solution in Python 2 for your Ardruino

    MerDAQ is a data acquisition GUI and other tools for collecting and storing time dependent. Originally designed to collect 4 temperature data vs. time and plot one of the temperatures in real time with matplotlib. Ideal for use with Arduino.
    Downloads: 0 This Week
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  • 22
    LOOS

    LOOS

    Analyze molecular simulation data

    LOOS is a light-weight object oriented software library for creating new tools for analyzing molecular simulation data, written in C++. The main design goal is to allow casual programmers to easily implement new analysis methods. THIS PAGE IS NO LONGER UPDATED. Please see https://github.com/GrossfieldLab/loos for all recent developments
    Downloads: 1 This Week
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  • 23
    Gamera is a framework for the creation of structured document analysis applications by domain experts. It combines a programming library with GUI tools for the training and interactive development of recognition systems.
    Downloads: 0 This Week
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  • 24

    Py3DN

    Morphometric analysis and visualization of the 3D structure of neurons

    Py3DN, is an open-source solution providing innovative tools to analyze 3D data collected with the widely used commercial system Neurolucida (MBF). It allows the construction of mathematical representations of neuronal topology, visualization and a variety of morphometric analysis on the neuronal structures. Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses.
    Downloads: 0 This Week
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  • 25
    Software for speech research. It includes programs and libraries for signal processing, along with general purpose scientific libraries. Most of the code is in Python, with C/C++ supporting code. Also, contains code releases corresponding to publishe
    Downloads: 0 This Week
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