Search Results for "Open Source Discovery Open Source & DevTools" - Page 33
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Showing 2170 open source projects for "Open Source Discovery Open Source & DevTools"
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ActiveFolder
ActiveFolder can be integrated with existed scientific computation.
Welcome to the ActiveFolder project, the open source for management simulataion data and reproducing. ActiveFolder provide data reproduction for comparative study and searching reproduction data, by storing data coupled with provenance information. ActiveFolder is integrated existed grid computing service and cloud services. And also, ActiveFolder can be integrated with existed scientific computation, analysis and visualization software without modification. -
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caplib
Correct, translate and analyze combinatorial library sequencing data
Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file. -
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ctqa-cp
Automatic analysis of CT images of the CatPhan600/504 phantom
Hosted at google code, for latest version please go to: https://code.google.com/p/ctqa-cp/ Automatic image quality analysis of computed tomography images of the CatPhan? phantom. CTQA is a software package to aid in quality assurance of image quality for CT scanners. The software currently only supports analysis of CT-images of the CatPhan600? phantom. Other phantoms may be supported upon request. The purpose of CTQA-cp is twofold: 1) To handle and analyze image sets consisting of a few... -
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MYRaf Project
An Easy GUI for IRAF Photometry
The MYRaf is a practicable astronomical image reduction and photometry software and interface for IRAF. For this purpose, MYRaf uses iraf, PyRAF and alipy via great programming language Python and Qt framework. Also MYRaf is a absolutely free software and distributed with GPLv3 license. You can use it without restrictive licenses, make copies for your friends, school or business. -
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"gtdev" is an open source tool which assists the engineer in developing a new gas turbine (1D Thermo- and Aerodynamics). It is created by the student research group "Hummingbird - TUM Gas Turbines" placed at the LFA, TU Munich: http://www.hummingbird.tum.de
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WISP
Weighted Implementation of Suboptimal Paths (WISP)
UPDATE: LATEST VERSION AT http://git.durrantlab.com//jdurrant/wisp Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. Traditionally, computational efforts have focused on the most optimal path... -
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binary Turing Machine
A Turing Machine Simulator
Free binary Turing Machine simulator with a graphical user interface and possibility to save your files. Language : French (no translation available) -
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OpenCMISS-Zinc
A Library for Interactive Modelling and Visualisation
The OpenCMISS-Zinc Library (opencmiss.org/zinc), or Zinc, is a software library for building interactive graphical modelling and visualisation applications. Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image... -
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We aim to develop a transformative computational method for automatic discovery of a set of dynamical rules that best captures both state transition and topological transformation in the data of spatio-temporal evolution of a complex network.
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Implementation in Python of some of the statistical methods provided by "asurv", the survival analysis software.
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JointTrack will calculate and report the 3-D motions of bones or artificial implants from 2-D image data obtained from X-Ray films or fluoroscopic video.
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PyRadMon
Automated reporting of Geiger Muller counter readings to RadMon.org
This project includes several Python and bash scripts designed to connect Geiger Muller counters to report their results to RadMon.org. Soon the script will also feature local logging, graphing and alerting. Just because the Cold War is "over" does not mean that there is no more threat of a radiological attack. In fact, the U.S. Homeland Security Council lists the "Detonation of a 10 Megaton Improvised Nuclear Device" as "Scenario #1" among the top 15 threats to American security. Or,... -
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Automatically geocode pictures from your camera and a GPS track log. Following Google code closure the only official webpage is (doc, support, code) : https://github.com/notfrancois/GPicSync
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Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
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kubos
A simple modular CAD application
Kubos is a CAD application which is in an early stage of development. A derivative version called Kubos Schript can be used for creating scripted objects. For installation instructions see https://sourceforge.net/p/kubos/wiki/Installation/ -
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pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
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Galactus
A neutral hydrogen galaxy modeling and fitting tool
Galactus is a new astronomical modeling package. The aim is to model and fit datacubes from radio synthesis telescopes. Galactus is the only HI tool which can predict the HI (self-)absorption. -
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Botnet Detectors Comparer
Compares botnet detection methods
Compares botnet detection methods by computing the error metrics by reading the labels on a NetFlow file. The original NetFlow should have a new column for the ground-truth label, and a new column with the prediction label for each botnet detection method. This program computes all the error metrics (TPR, TNR, FPR, FNR, Precision, Accuracy, ErrorRate, FMeasure1, FMeasure2, FMeasure0.5) and output the comparison results. It also ouputs a png plot. The program can compare in a... -
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AbMining ToolBox
python scripts to analyze antibody libraries
02-14-2014. Hamming distance calculation has been updated. These are python scripts to analyze antibody libraries sequenced by next generation sequencing methods (454, Ion Torrent, MiSeq) as described in D'Angelo et al MAbs. 2014 Jan 1;6(1):160-72. -
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pymatlab
A pythonic interface to MATLAB
This package lets Python users interface and communicate with MATLAB from Python. Pymatlab makes it easier for users to integrate a project with a large MATLAB codebase into python scripts by using MATLAB scripts as a part of the python program. The basic functionality of this package is to send data from Python to MATLAB's workspace to be able to run Matlab function on the data. After processing you retrieve back data to... -
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wfProc is going to be a Python module for waveform processing. The module will incude simple operations such as addition, subtraction etc, taking into account the timeline of the waveform, as well as filtering, fft and other more complex operations.
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DiagSim
Diagnostics simulation for particle accelerators
DiagSim is a collection of Python modules for simulating beam diagnostics in particle accelerators, at the moment only cavity BPMs, with other types of BPMs and other diagnostics to follow. Or so we think. Anyway, we use beam data exported from beam trackers, trace the signals through the diagnostics and processing, so that they can be processed as real data, and the input and measured beam parameters can be compared. -
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Selective Assembly GUI Application
ZEMAX extension for selective assembly
As the final step of manufacturing, assembly plays a very important role. During lens assembly, fabrication errors of components are summarized and dramatically affects lens performance. Selective assembly is cost-effective solution for improving the quality of assembled product. Also selective assembly could reduce cost of product by allowing loose tolerances. Selective Assembly GUI Application (SAGA) is ZEMAX extension which allows you to arrange components in best possible assemblies.
