Showing 151 open source projects for "python framework"

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  • 1

    Lute Tablature Toolkit for Gamera

    Optical Music Recognition for Tablature Notations

    A toolkit for the optical recognition of 16th century lute tablature prints. It is based on and requires the Gamera document image analysis framework (http://gamera.sf.net).
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  • 2
    Gamera is a framework for the creation of structured document analysis applications by domain experts. It combines a programming library with GUI tools for the training and interactive development of recognition systems.
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  • 3
    Modular toolkit for Data Processing MDP
    The Modular toolkit for Data Processing (MDP) is a Python data processing framework. From the user's perspective, MDP is a collection of supervised and unsupervised learning algorithms and other data processing units that can be combined into data processing sequences and more complex feed-forward network architectures. From the scientific developer's perspective, MDP is a modular framework, which can easily be expanded. The implementation of new algorithms is easy and intuitive. The new...
    Downloads: 6 This Week
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  • 4

    COFILOS

    A Development Framework for Coldfire

    Contains a framework for Coldfire MCUs like 52254. The framework supports a Command Line Interface (CLI) that may work from Serial port, USB or ENET. The framework uses Processor Expert and IDE requirement is MCU Eclipse 10.4 from Freescale. Includes the FunkOS Realtime Operating System by Funkenstein Software Consulting, available at http://funkos.sourceforge.net Mainly it is a support package for the development board Perseus, but I have ported also the RTOS to MCF52233DEMO board...
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  • 5
    openModeller is a complete C++ framework for species potential distribution modelling. The project also includes a graphical user interface, a web service interface and an API for Python.
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  • 6

    PyRate

    Bayesian Estimation of Speciation and Extinction from Fossil Data

    PyRate is a Python program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework. The method was described by D Silvestro, J Schnitzler, LH Liow, A Antonelli, and N Salamin in Systematic Biology (http://sysbio.oxfordjournals.org/content/early/2014/02/08/sysbio.syu006.abstract). *Please download the most up-to-date code from the "PyRate code" tab on this page or from: https://github.com/dsilvestro/PyRate * *An updated manual...
    Downloads: 3 This Week
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  • 7

    mwetoolkit

    THIS PROJECT MIGRATED TO https://gitlab.com/mwetoolkit/mwetoolkit3/

    THIS PROJECT MIGRATED TO https://gitlab.com/mwetoolkit/mwetoolkit3/ The Multiword Expressions toolkit aids in the automatic identification and extraction of multiword units in running text. These include idioms (kick the bucket), noun compounds (cable car), phrasal verbs (take off, give up), etc. Even though it focuses on multiword expresisons, the framework is quite complete and can also be useful in any corpus-based study in computational linguistics. The mwetoolkit can be applied...
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  • 8
    Stochastic Rule Builder (SRB)

    Stochastic Rule Builder (SRB)

    Modeling framework for capturing positional and temporal dynamics

    We present a modeling framework aimed at capturing both the positional and temporal behavior of transcriptional regulatory proteins. There is growing evidence that transcriptional regulation is the complex behavior that emerges not solely from the individual components, but rather from their collective behavior, including competition and cooperation. Our framework describes individual regulatory components using generic action oriented descriptions of their biochemical interactions with a DNA...
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  • 9
    Collective Mind Technology

    Collective Mind Technology

    plugin-based framework for systematic and reproducible experimentation

    New version moved to http://github.com/ctuning/ck Collective Mind framework (cM) is an open-source plugin-based schema-free repository and infrastructure for collaborative, systematic and reproducible research and experimentation. This 3rd version (started in 2006) helps to implement, preserve, share and reproduce the whole experimental setup as connected modules and data. cM uses crowdsourcing to leverage knowledge and computational resources of multiple users. For example, it includes...
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  • 10
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
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  • 11

    pipasic

    pipasic: Protein Abundance Correction in Metaproteomic Data

    ... in the analysis of metagenomic samples and require specific solutions. pipasic (peptide intensity-weighted proteome abundance similarity correction) is a tool which corrects identification and spectral counting based quantification results using peptide similarity estimation and expression level weighting within a non-negative lasso framework. pipasic has distinct advantages over approaches only regarding unique peptides or aggregating results to the lowest common ancestor.
    Downloads: 0 This Week
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  • 12

    fitGCP

    Fitting genome coverage distributions with mixture models

    ... this information accessible can improve the quality of sequencing experiments and quantitative analyses. fitGCP is a framework for fitting mixtures of probability distributions to genome coverage profiles. Besides commonly used distributions, fitGCP uses distributions tailored to account for common artifacts. The mixture models are iteratively fitted based on the Expectation-Maximization algorithm. Please find the accompanying paper here: http://dx.doi.org/10.1093/bioinformatics/btt147
    Downloads: 0 This Week
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  • 13

    Raysect Python Raytracing Framework

    A raytracing framework for optical/non-optical physics simulations

    This project has migrated to github: https://github.com/raysect
    Downloads: 0 This Week
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  • 14
    RoboComp
    RoboComp is a robotics framework providing a set of open-source, distributed, real-time robotic and artificial vision software components and the necessary tools to create and manage them.
    Downloads: 0 This Week
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  • 15
    Gadgetron

    Gadgetron

    Medical Image Reconstruction Framework

    Medical Image Reconstruction Framework
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  • 16
    A python framework for fuzzy inference computations
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  • 17
    OverView

    OverView

    Optimization and visualization tool for CFD.

    OVERVIEW is a framework for optimization that integrates the visualization of complex fluid solutions and geometries taking advantage of the high performance and cutting edge rendering techniques of modern graphic cards.
    Downloads: 0 This Week
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  • 18
    SocExplorer

    SocExplorer

    SocExplorer, an open source System On Chip testing software/framework.

    SocExplorer is an open source generic System On Chip testing software/framework. We write this software for the development and the validation of our instrument, the Low Frequency Receiver(LFR) for the Solar Orbiter mission. This instrument is based on an actel FPGA hosting a LEON3FT processor and some peripherals. To make it more collaborative, we use a plugin based system, the main executable is SocExplorer then all the functionality are provided by plugins. Like this everybody can provide...
    Downloads: 0 This Week
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  • 19
    pyfuzzy is a framework to work with fuzzy sets and process them with operations of fuzzy logic.
    Downloads: 0 This Week
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  • 20
    We aim to develop a transformative computational method for automatic discovery of a set of dynamical rules that best captures both state transition and topological transformation in the data of spatio-temporal evolution of a complex network.
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  • 21
    MYRaf Project

    MYRaf Project

    An Easy GUI for IRAF Photometry

    The MYRaf is a practicable astronomical image reduction and photometry software and interface for IRAF. For this purpose, MYRaf uses iraf, PyRAF and alipy via great programming language Python and Qt framework. Also MYRaf is a absolutely free software and distributed with GPLv3 license. You can use it without restrictive licenses, make copies for your friends, school or business.
    Downloads: 0 This Week
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  • 22
    Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
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  • 23
    pyMantis
    pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
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  • 24

    Experiment manager

    Computer science experiment manager

    experimaestro is an experiment manager, and is composed of (1) a job scheduler that handles dependencies and locking (2) a modular experiment description framework, that allows easy description of the various parts of an experiments.
    Downloads: 0 This Week
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  • 25
    BETR-Research (BETRS) is a modelling framework to create spatially resolved multimedia models for the environmental fate- and transport of chemical contaminants. It is intended to serve the research community and can be used as a teaching tool.
    Downloads: 1 This Week
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