Showing 99 open source projects for "programming"

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  • 1

    hrefinder

    Detection of homologous recombination events from SNP data

    ...Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of SNPs differs from the ancestral allele, it may be better explained as a mutation or sequencing error. But if a series of SNP alleles differ from the ancestral pattern, then it may be more likely that an HRE has occurred, particularly if the allele pattern matches that from another part of the tree better than that of the ancestral node.
    Downloads: 0 This Week
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  • 2

    YEI 3-Space C API

    A C API for interfacing with the YEI 3-Space family of IMUs.

    The YEI 3-Space Sensor Application Programming Interface (API) is a series of functions, classes, and structure definitions designed to make writing applications that utilize the YEI 3-Space family of sensors fast and easy to support. The C/C++ variant of the API is built as a header (.h) and dynamic link library (.dll + .lib). With the C/C++ API, users that require easy integration of the 3-Space family of sensors into programming environments not natively supported may import the dynamic link library and call its contained functions from the importing program, as the API's function prototypes are all compiled as C prototypes and are name mangled as such.
    Downloads: 16 This Week
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  • 3
    A web-based interface for the Hadoop MapReduce framework that simplifies the process of writing and running MapReduce jobs. Aimed at introducing parallelism concepts in introductory computer science courses.
    Downloads: 0 This Week
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  • 4

    KSR10 USB Python controller

    Control the KSR10 Robot Arm (Velleman) through USB with Python.

    This project aims to control the KSR10 Robot Arm (Velleman) through USB with the programming language Python. Requirements: - Python (tested with version 2.6 and 2.7) - modules: pyusb (wich on itself requires libusb or openusb)
    Downloads: 0 This Week
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  • 5

    Pysimony

    A Pythonic Implementation of Parsimony Inference of Phylogeny

    ...As all parts of the program are the original work of a beginner programmer, this may represent one of the worst approaches to solving the phylogenetic problem. I have clearly avoided object-oriented programming. Nevertheless, I distribute this imagining it might someday be slightly educational or at least provide a laugh at the pathetic attempt it makes to reinvent the wheel
    Downloads: 0 This Week
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  • 6
    OPyCua

    OPyCua

    OPC UA communication stack written in python

    The goal of this project is to implement an OPC UA communication stack using the python programming language. Currently we are working on a series of articles, describing how we can use python to implement the communication stack. Some code snippets have already been written!
    Downloads: 0 This Week
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  • 7
    A compiler wrapper and a set of editor plugins allowing you to easily use Greek letters, accents, and other Unicode symbols in any programming language.
    Downloads: 0 This Week
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  • 8

    YEI 3-Space Python API

    A Python API for interfacing with the YEI 3-Space family.of IMUs.

    The YEI 3-Space Sensor Application Programming Interface (API) is a series of functions, classes, and structure definitions designed to make writing applications that utilize the YEI 3-Space family of sensors fast and easy to support. The included module and support files handles message formatting, serialization of commands, conversion of return data to friendly data types, and 3-Space unit management.
    Downloads: 3 This Week
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  • 9
    PyEPL (Python Experiment-Programming Library) is a library for coding psychology experiments in Python. It supports presentation of both visual and auditory stimuli, and supports both manual (keyboard/joystick) and sound (microphone) input as responses.
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    Downloads: 16 This Week
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  • 10
    OWSLib is a Python package for client programming with Open Geospatial Consortium (OGC) web service (hence OWS) interface standards, and their related content models.
    Downloads: 0 This Week
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  • 11
    Khronos DES
    General purpose discrete event simulation (DES) framework for the Python programming language. Khronos gathers ideas from other simulation software and tries to provide a simple and poweful toolset for simulation of discrete systems.
    Downloads: 0 This Week
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  • 12
    MBLogic
    Complete manufacturing automation platform for factory and process equipment. It includes multi-protocol communications (including Modbus/TCP), PLC soft logic, HMI, and tools for troubleshooting and installation in 4 comprehensive packages.
    Downloads: 6 This Week
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  • 13
    Protein ALignment Optimizer
    Protein ALignment Optimiser (PALO) is a script for the selection and alignment of the best combination of transcripts among orthologous genes. PALO is mainly written in Python, although other programming languages are also implemented (R, Perl...).
    Downloads: 0 This Week
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  • 14
    This project is a complete cross-platform (Windows, Linux) framework for Evolutionary Computation in pure python. See the project site at http://pyevolve.sourceforge.net or the blog at http://pyevolve.sourceforge.net/wordpress
    Downloads: 0 This Week
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  • 15
    Marba
    Educative desktop application that it's main goal is develop any kind of mathematical operation in an easy and quick way. It's focus to users that don't have programming knowledge.
    Downloads: 0 This Week
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  • 16
    Distributed Parallel Programming for Python! This package builds on traditional Python by enabling users to write distributed, parallel programs based on MPI message passing primitives. General python objects can be messaged between processors. Ru
    Downloads: 0 This Week
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  • 17
    Shared Substance is a programming framework and middleware for developing distributed interactive application. The environment written in Python, operating on the data-oriented programming model.
    Downloads: 0 This Week
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  • 18
    This project includes a set of tools and guidelines designed for rapid production of large-scale embedded systems projects. The tools enable quick generation of reusable, reconfigurable hardware, using a user-specified hardware description language.
    Downloads: 0 This Week
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  • 19
    BCI Project Triathlon
    A three-step approach towards experimental brain-computer-interfaces, based on the OCZ nia device for EEG-data acquisition and artificial neural networks for signal-interpretation.
    Downloads: 0 This Week
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  • 20
    IFoam
    IFoam is an OpenFOAM derived framework. It uses Python programming language for definition of its API. Itegrates visual components for limited post-processing. Provides access to some GUI components for more efficient set up the simulation cases.
    Downloads: 0 This Week
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  • 21
    Pypar is an efficient but easy-to-use module that allows programs written in Python to run in parallel on multiple processors and communicate using MPI. Pypar development has moved to http://code.google.com/p/pypar/
    Downloads: 0 This Week
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  • 22
    The project holds the files for the Explorer Post 6201 Programming in Python project. The project for 2006 is an information organizer (final name TBD).
    Downloads: 0 This Week
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  • 23
    Pydusa is a package for parallel programming using Python. It contains a module for doing MPI programming in Python. We have added parallel solver packages such as Parallel SuperLU for solving sparse linear systems.
    Downloads: 0 This Week
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  • 24
    UfakPython is a small subset of Python programming language, for small embedded devices, like PICs. UfakPython sources are translated to C by UfakPython Compiler. Small Device C Compiler can then compile the C outputs to the target device's codes.
    Downloads: 0 This Week
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  • 25
    PyDocumentary, is a class file that allows for a straight forward movement of information in a python simulation to a latex report. It is not a form of literate programming.
    Downloads: 0 This Week
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