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Showing 223 open source projects for "https"
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biblioAssist
python3 version of bibus
python3 version of bibus https://sourceforge.net/projects/bibus-biblio/ It is nothing more than "it works on Debian testing (bookworm) AMD64. " -
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..."Modelling the geometry of textile reinforcements for composites: TexGen", Chapter 8 in "Composite reinforcements for optimum performance (Second Edition)", ed. P Boisse, Woodhead Publishing Ltd, 2021, ISBN: 978-0-12-819005-0. https://doi.org/10.1016/B978-0-12-819005-0.00008-3 Lin, H., Brown, L. P. & Long, A. C. 2011. Modelling and Simulating Textile Structures using TexGen. Advanced Materials Research, 331, 44-47. To reference version 3.13.0 please use: Louise Brown, mike-matveev, & georgespackman. (2023). louisepb/TexGen: TexGen v3.13.1 (v3.13.1). Zenodo. https://doi.org/10.5281/zenodo.8221491
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Br-Gogo is a Brazilian open-source version of the Gogo Board project. Developed by CTI, a Brazilian research center. **<div class="sf-root" data-id="250926" data-badge="oss-users-love-us-white" style="width:125px"> <a href="https://sourceforge.net/projects/br-gogo/" target="_blank">Br-Gogo</a> </div>**
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...Its aim is to make machine learning possible for novice users by means of a simple, consistent API, while simultaneously exploiting C++ language features to provide maximum performance and flexibility for expert users. * More info + downloads: https://mlpack.org * Git repo: https://github.com/mlpack/mlpack
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CodonU
A python project for analysis of codon usage for gene or genome analys
...This open-source project incorporates various statistical measures necessary for codon usage analysis, including codon adaptation index, codon bias index, Gravy score, and correspondence analysis for both nucleotide and protein sequences. Start using CodonU today and see how it can revolutionize your genomics research! Find more at: https://github.com/SouradiptoC/CodonU Documentation link: https://souradiptoc.github.io/CodonU Example Link: https://github.com/SouradiptoC/CodonU/tree/master/Examples -
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Python Power Electronics
Circuit simulator for power electronics
An open source circuit simulator for power electronics applications. The objective is to provide a platform that will enable an advanced user to simulate large systems with several converters without being an excessive burden on the CPU. -
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Discursive Dilemma
Optimal Decision Rules for the Discursive Dilemma
Accompanying software for the paper "Optimal Decision Rules for the Discursive Dilemma", by A. Alabert, M. Farré and R. Montes (https://arxiv.org/abs/2210.13100). Computes a ranking of the best decision rules according to a quantitative criterion based on the minimisation of the combined probabilities of false positives and false negatives -
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TheoDORE
Theoretical Density, Orbital Relaxation and Exciton analysis
...TheoDORE is interfaced to a number of quantum chemical programs (Q-Chem, Columbus, Turbomole, ...) and can be used for a wide range of excited state methods (MR-CI, ADC, CC, TDDFT). It is written in a modular fashion to allow for an easy extension of these capabilities. Code development moved to github: https://github.com/felixplasser/theodore-qc -
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XRD CUBIC
Simulate crystal cell length (a), Miller indices {h, k, l}, d-spacing
...Designed by: Dr. M Kanagasabapathy, Asst. Professor, Department of Chemistry Rajus’ College, Madurai Kamaraj University, Rajapalayam, (TN) INDIA 626117 Home Page: https://www.enote.page/2021/12/XRD-Cubic.html -
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XISMuS
X-Ray Imaging Software for Multiple Samples
...IMPORTANT FIXES in respect to base v2.0.0 version: v.2.5.0 introduces the Differential Attenuation and Cube Viewer utilities, and migrates user database to *.json files v2.4.3 fixes a with K element in the fit-approx method v2.4.3 fixes and issue where saving plots with fit-approx or a auto-wizard could freeze the software v2.4.2 introduces Image Viewer to Mosaic v2.4.1 fixes an issue in merging H5 or EDF datasets with Mosaic Full changelog at https://linssab.github.io/history X-Ray Fluorescence Imaging Software for Multiple Samples is an open source software to manipulate and study macro-X-Ray Fluorescence (MA-XRF) datasets. XISMuS also works as a sample management tool, where you can easily change between datasets (samples) and compare, cross-interact and normalize them. -
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GDAL wheels for linux
GDAL wheels for python and C/C++ projects (Linux only)
To use precompiled wheels: 1) go to releases (Files) and download tarball needed; 2) install it with command: python3 -m pip install /path/to/wheel.whl Or simply use URL in pip: python3 -m pip install https://sourceforge.net/projects/gdal-wheels-for-linux/files/GDAL-3.1.4-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl/download URL may be found under "View details" button (i) To use GDAL in C/C++ project you need to link gdal lib AND all libs located at dir GDAL.libs (usually this folder resides inside python site-packages) To compile your own wheels see information given at forefather project: https://github.com/youngpm/gdalmanylinux Usually this is done via command `make wheels` GDAL wheels for Windows are provided by Christoph Gohlke at https://www.lfd.uci.edu/~gohlke/pythonlibs/#gdal Built with PROJ (proj.db is included), GEOS, EXPAT. ... -
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pyModSlave
Modbus TCP/RTU Slave Software.
...You can install the python module or use the precompiled (for Windows only) stand alone GUI (Qt based) utility (unzip and run). pyModSlave also includes a bus monitor for examining all traffic on the bus. You can also download it from pypi <https://pypi.org/project/pyModSlave/>. pyModSlave is based on modbus-tk <http://code.google.com/p/modbus-tk/>, pySerial <https://github.com/pyserial/pyserial> and pyQt5 <http://www.riverbankcomputing.co.uk>. Check out my modbus master project <http://sourceforge.net/projects/qmodmaster/>. Checkout the following youtube videos : Modbus RTU <https://youtu.be/1get1ELKz_A> Modbus TCP <https://youtu.be/nX_kTQwK2f4> Session <https://youtu.be/y_9Di7E3y8w> Log <https://youtu.be/Xcb6sj1uzyY> -
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HistogramsApp
Application that generates KDE-PDP plots from geochronological data
...And the Zenodo repository where the source code is available: 2) Rodriguez Corcho (2021). andresrcorcho/CGD_HistogramsApp: HistogramsApp_1.5 (1.5). Zenodo. https://doi.org/10.5281/zenodo.5171646 (https://zenodo.org/record/5171646#.YZ4X9r3P27M) -
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FreeCAD-PCB
Import your PCB boards to FreeCAD
.... ***** Supported software: - Eagle (*.brd) - Razen (*.rzp) - FreePCB (*.fpc) - gEDA (*.pcb) - FidoCadJ (*.fcd) - KiCad (*.kicad_pcb) - IDF v2/v3 Requirements: FreeCAD >= 0.14 Project forum: https://sourceforge.net/p/eaglepcb2freecad/forum/ -
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JSONVisor
Visor for mass spectrometry JSON files generated by Integrator
Visor for mass spectrometry JSON files generated by the Integrator program (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/jsonvisor3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124 -
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Xmaldi
Viewing collections of MALDI spectra and perform PCA and DFA analyses
Xmaldi is an application for viewing collections of MALDI spectra and perform PCA and DFA analyses on them (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/xmaldi3/code/ci/default/tree/README.md -
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LaiaMotifs
Search for MHC-like motifs in peptide collections
Search for MHC-like motifs in peptide collections (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/laiamotifs3/code/ci/default/tree/README.md -
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LP CSIC/UAB Apps and Code
Software and Code from Laboratori de Proteòmica CSIC/UAB
Software, Code and Documents from Laboratori de Proteòmica CSIC/UAB ( LP-CSIC/UAB: http://proteomica.uab.cat ) -
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aseryla
Aseryla code repositories
This project describes a model of how the semantic human memory represents the information relevant to the objects of the world in text format. It provides a system and a GUI application capable of extracting and managing concepts and relations from English texts. https://aseryla2.sourceforge.io/ -
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KimBlast
Blast+ the easy way
KimBlast GUI formats and indexes Fasta databases for Blast, performs Blast searches and analyzes results. Python 3.x version. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/kimblast3/code/ci/default/tree/README.md -
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U-Net Fusion RFI
U-Net for RFI Detection based on @jakeret's implementation
...Additional work is being done to add custom layers to this model for further experimentation, including Squeeze/Excitation layers (unimplemented.) Sum Threshold (in fusion as an expert, and in testing as a comparison) requires the use of AOFlagger by Andre Offringa. You can find this code at https://gitlab.com/aroffringa/aoflagger. This project will use the aoflagger program within the code, so you may need to ensure that any environment variables are set for aoflagger before use. cite: https://sourceforge.net/p/u-net-fusion-rfi/wiki/cite/ -
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MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
...MToolBox provides also a Variant Call Format file (version 4.0) featuring, for the first time, allele-specific heteroplasmy. Please, check out the most recent updates of the source code with the Github repository of MToolBox: https://github.com/mitoNGS/MToolBox or visit the Web version of MToolBox @ MSeqDR: https://mseqdr.org/mtoolbox.php -
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--- IMPORTANT : This project has been moved to GitHub at https://github.com/clstoulouse/motu-client-python. Download the last version from the release page https://github.com/clstoulouse/motu-client-python/releases. --- Motu is a high efficient and robust Web Server which fills the gap between heterogeneous Data Providers to End Users. Motu handles, extracts and transforms oceanographic huge volumes of data without performance collapse.
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parent-map
Analyze parental contributions to evolved or engineered protein or DNA
Documentation: https://parent-map.readthedocs.io/
