Search Results for "gnu science" - Page 27
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Showing 946 open source projects for "gnu science"
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BARNACLE is a Python library for RNA 3D structure prediction. It can be used for probabilistic sampling of RNA structures that are compatible with a given nucleotide sequence and that are RNA like on a local length scale.
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A HTML scraper that uses machine learning frameworks to extract labelled fields from raw HTML. The project also involves the development of a tool to display the semi structured data generated by the scraper component.
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A colorized interactive dotplot program designed for pair-wise comparisons of RNA & DNA. The original idea was from the mind of late Prof. William J. Dreyer of Caltech. The idea is to be able to see the "tapestry" of life, which comes alive with color.
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A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.
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FociCounter is a simple and user-friendly program for analysis of gamma-H2AX foci. It allows to determine the number of foci in a single cell, a foci intensity as well as a cell intensity.
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Use SASSIE to generate and manipulate large numbers of molecular structures and then calculate the SAXS, SANS, and neutron reflectivity profiles from atomistic structures. Use for intrinsically disordered proteins. We need alpha-testers and developers.
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The MeqTree project provides a modelling, simulation and calibration toolkit aimed at (but not exclusive to) radioastronomical applications.
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MATmute is a MATLAB code mutation system targeted at developers of scientific software. The package includes a mutator, a MATLAB function to call the mutator and run the mutants, and some examples to demonstrate how to use the system.
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ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
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The Poll and Command Service (PCS) project aim is to develop a management and interfacing system for the Khepera III and Koala robots.
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Spyse is a software framework for building multi-agent systems. It allows Python developers to build distributed intelligent systems of multiple cooperative agents based on FIPA, OWL, SOA and many others. Spyse is designed for ease-of-use and fun.
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Tandem mass spectral peptide identification and validation software, similar to X!Tandem, OMSSA, MyriMatch. Suitable for single hosts through large clusters. Written in Python for simplicity, with performance-critical sections in C++.
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This project implements an algorithm for segmenting protein sequences into smaller meaningful blocks. The method is based on the pure statistical approach and it uses an analogy between proteins and natural language.
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CitySpeed is a Python package that uses online mapping services to gather statistics on the efficiency and complexity of road networks. This can be used to create maps showing how fast you can drive around a particular city.
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Brainlab is a Python toolkit to aid in the design, simulation, and analysis of spiking neural networks with the NeoCortical Simulator (NCS).
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This project is started out of the idea to simulate simple creatures like game of live. The goal is to build up an multi processor/host environment to simulate the building of simple live in given world environments.
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GAI is a graphical GIS based front end to ANUGA which allows convenient and visual tools for setting up hydrodynamic models. GAI depends on ANUGA to run the models created by GAI.
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Spasmos is a Python package that allows scientists to simulate the dynamics of highly collisional plasmas using a number of numerical methods.
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Add-ons to the ECMWF GRIB API. This project is about developing and maintaining add-ons to the GRIB API, like language bindings or documentation. The main GRIB API page is at http://www.ecmwf.int/products/data/software/grib_api.html
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GmshMorph is a tool to be used with GMSH, the meshing program by Christophe Geuzaine and Jean-François Remacle, for oceanographic and land-based fluid dynamics modelling. The program shapes meshes produced by GMSH to fit specified contour data.
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This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
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This project aims to provide an open source fleet management system with special focus on modularity and integration.
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