Search Results for "latest linux" - Page 2
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Showing 37 open source projects for "latest linux"
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Latest on Arxiv
Parse the latest Arxiv RSS stream and get your institute preprints
Latest on Arxiv is a program/script with a simple job to do. Every day, it will download all pdf files from your favorite Arxiv RSS, and will then scan it to see if any authors from your favorite institute(s) are on there. If so, it will save the resulting index. The matched files are then parsed into a short list, featuring only the latest 4 preprints (which is ideal for a single TV screen in the coffee corner), and a long list which contains every paper in a clickable way. I provide... -
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C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
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Create, check, annotate, merge, diff, split SBML (System Biology Markup Lanugage) documents. The latest version of semanticSBML is webbased with a RESTful interface.
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WISP
Weighted Implementation of Suboptimal Paths (WISP)
UPDATE: LATEST VERSION AT http://git.durrantlab.com//jdurrant/wisp Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. Traditionally, computational efforts have focused on the most optimal path... -
Run Any Workload on Compute Engine VMsCompute Engine delivers high-performance virtual machines for web apps, databases, containers, and AI workloads. Choose from general-purpose, compute-optimized, or GPU/TPU-accelerated machine types—or build custom VMs to match your exact specs. With live migration and automatic failover, your workloads stay online. New customers get $300 in free credits.
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AMBIENT
Find active modules in metabolic networks using high-throughput data
IMPORTANT: Since publication of the AMBIENT method in BMC Sys Bio, several updates have been made. If you wish to use the version used in the paper it is v0.6.3, however I recommend using the latest version which works in the same way but with additional options and has stability and performance improvements. Thanks for your interest! AMBIENT (Active Modules for Bipartite Networks) is a Python module that uses simulated annealing to find areas of a metabolic network (modules) that have... -
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pyscope
Software oscilloscope using Python and tkinter
Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually. It has been renamed "pdatascope" to avoid a name-clash with Pyscope, a scoping package on PyPi. See https://sourceforge.net/p/pydatascope/ for the latest code. -
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UPDATE: The latest version of NNScore1 can be found here: http://git.durrantlab.com/jdurrant/nnscore1 The latest version of NNScore2 can be found here: http://git.durrantlab.com/jdurrant/nnscore2 ================ NNScore is a scoring function for characterizing the potency of receptor-ligand complexes. It is based on neural networks, computational models that simulate the microscopic organization of the brain.
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The Virtual Commons (http://commons.asu.edu) is an open software initiative devoted to computational experiments on collective action and resource governance and funded by Arizona State University's Center for Behavior, Institutions, and the Environment (http://cbie.asu.edu). NOTE: we've moved our development to GitHub at https://github.com/virtualcommons - please look for the latest versions there.
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MathBench
A Python IDE optimized for scripting and easy access to documentation.
Not a whole lab, just a small bench ! **Feel free to contact me via https://sourceforge.net/sendmessage.php?touser=1865508 if you want to take over this project** Mathbench is intended for the development of short scripts such as those daily used when doing research in applied mathematics and physics. Simple widgets and a strong plugin system make it useful and extensible. ANNOUCEMENT: Mathbench's purpose is still relevant and could also benefit from the latest improvements of... -
Go from Data Warehouse to Data and AI platform with BigQueryBigQuery is more than a data warehouse—it's an autonomous data-to-AI platform. Use familiar SQL to train ML models, run time-series forecasts, and generate AI-powered insights with native Gemini integration. Built-in agents handle data engineering and data science workflows automatically. Get $300 in free credit, query 1 TB, and store 10 GB free monthly.
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SAGE is a free and open source mathematics software available from http://www.sagemath.org. The latest version (as of Jan 2012) is 4.7. Please do NOT download the much older version from sourceforge!
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PyCrust is an interactive Python shell written in Python using wxPython. PyCrust is now part of wxPython (www.wxpython.org), so packaged files are no longer available here, and the latest development version has moved to the wxWindows CVS repository.
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malty_DEPRECATED
translates alignments of A-to-B and B-to-C to A-to-C; has BAM support
Development moved to: https://bitbucket.org/rongchenlab/malty Docs moved to: http://malty.readthedocs.org/en/latest/
