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This project aims to be a easy-to-use toolkit of algorithms and utilities for semantic data mining. So far all algorithms are implemented as web services and we provide widgets for their use in the Orange4WS data mining platform.
Modelio-Open is a project hosting a set of open source extensions (SoaML, SysML and UML Testing Profile) for a previous version (1.2) of the Modelio Free tool .
Currently, the lastest version (2.x) of Modelio modeling and generation tool is available at http://modelio.org/downloads/download-modelio.html. All extensions are downloadable at http://forge.modelio.org/projects.
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In Systems Biology models are created in various formats (Matlab, Java, C/C++, Python, ...). "Annotate Your Model" will help you to link your model to biological web resources by creating a CSV file containing MIRIAM annotations.
The Virtual Commons (http://commons.asu.edu) is an open software initiative devoted to computational experiments on collective action and resource governance and funded by Arizona State University's Center for Behavior, Institutions, and the Environment (http://cbie.asu.edu).
NOTE: we've moved our development to GitHub at https://github.com/virtualcommons - please look for the latest versions there.
A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.
PowerTalk automatically speaks Microsoft PowerPoint presentations. For presenters who find speaking difficult, audiences containing people with visual impairments and fun educational uses. Uses synthesised computer speech provided with Windows
This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts
Crow - Computational Representation Of Whatever. A platform for the integration and mining of complex and distributed data. Represents cross-linked semantic web documents as a network of software objects and offers easy ways to filter, and sort them.
Wattos is a collection of mostly Java programs for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.
The goal of zAutomation project is to design/implement hardware, firmware and software for remote control and monitoring of physical objects, by using the ZigBee technology and internet. The field of application is robotics and domotics.
Design and develop Recommendation and Adaptive Prediction Engines to address eCommerce opportunities. Build a portfolio of engines by creating and porting algorithms from multiple disciplines to a usable form. Try to solve NetFlix and other challenges.
iROS is a meta-operating system for technology-rich "interactive rooms". The core components (Event Heap, DataHeap, iCrafter) provide communication, data storage, and service management for an iRoom.
BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.
A configurable knowledge management framework. It works out of the box, but it's meant mainly as a framework to build complex information retrieval and analysis systems. The 3 major components: Crawler, Analyzer and Indexer can also be used separately.
SIP (Sample Inventory Program) is a web application for managing mass quantities of lab samples. It is the first out-of-the-box Zope 3 app, and is field-proven.
SIP may be used as-is, or as inspiration for other Zope 3 apps. (e.g. O/R RDBMS storage)
Healthcare Xchange Protocol for interoperative communications. Data exchange/transfer, platform independent,XML-RPC, HL7, SOAP, EDIFACT, simple,easy, authenticated, secure, transparent, no geo-restrictions, open sourced, peer reviewed, collab development