Search Results for "web-based" - Page 13
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Showing 757 open source projects for "web-based"
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GnuVet
Open Source Vet Practice Management
Veterinary Practice Management program for management, documentation, accounting etc. in the veterinary practice. Easy to use, intuitive structure. python + PyQt4, postgres database as storage engine. PRE-ALPHA! -
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InMethyl
Design of target-specific primers for bis. sequencing of CpG-islands
...This balance is based on the calculation of scoring factor including primer pair specificity, nucleotide composition (sequence complexity), thermodynamic features (melting temperature, dimers dG etc.), presence of CpG-sites and other parameters. Users are intended to customize the desired or limit ranges of these values, as well as penalties for out-of-bounds values. -
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Hydroponic Automation Platform (HAPI)
Technologies for automating food production on various scales
The Hydroponic Automation Platform Initiative (HAPI) develops and provides hardware and software components for automating food production using hydroponic, aquaponics, and precision agriculture techniques. High-yield production in urban settings is one of the primary goals. Artifacts include hardware design (mainly Arduino-based), firmware, management software and reporting modules. -
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Ymap - Yeast Mapping Analysis Pipeline
Pipeline for large-scale genome changes analysis of genome datasets.
The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of... -
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LibppGam
pp->gamma cross sections parametrization
This library contains the parametrization of pp->gamma cross section functions based on Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369) work. The functions are written in Python, Fortran and Matlab. Please, if you use this library DO NOT reference to this webpage, instead reference to Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369), "Parametrization of gamma-ray production cross-sections for pp interactions in a broad proton energy range from the kinematic threshold to PeV energies" by Ervin Kafexhiu, Felix Aharonian, Andrew M. ... -
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MDcons(Molecular Dynamics consensus)
Interpretation of Biomolecular MD simulations
MDcons is a tool to analyze conserved contacts during Molecular Dynamics (MD) simulations of Protein, Rna, Dna & Ligand based complexes. The input is either a Molecular Dynamics trajectory or a set of snapshots. The input can also be a single snapshot. The outputs are (1) map of most/less frequently conserved contacts during MD (2) a list of most/less frequently conserved contacts during MD. -
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miRStat
identification of common sets of microRNAs for groups of genes
miRStat enables identification of regulatory microRNA targeting several genes in a custom gene group. This Python application is based on the TargetScan 6.2 microRNA target prediction data. Conserved and Nonconserved site context+ scores files are required (unzip and place to directory with program). Available at http://targetscan.org/cgi-bin/targetscan/data_download.cgi?db=vert_61 -
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Spatio-temporal simulation environment (STSE) is set of tools used to perform spatio-temporal simulations, dedicated mainly to biological systems. Main development language is Python. Tools are currently based on: EPD, VTK, qhull, openalea, PlantGL.
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mitoMaker
mitoMaker - a mitochondria assembly and annotation script
mitoMaker is a pipeline script developed to simplify the assembly and automatic annotation of mitochondrial genomes, based on raw NGS reads and an optional target reference. mitoMaker calls well known assemblers and algorithms, such as SOAPdenovo, MIRA and blast+ and parses their results providing easily readable outputs, such as FASTA, GENBANK, SEQUIN, PNG and others. General pipeline: 1-iterative De Novo assembly, with different k-mer values, trying to assemble a build that matches a target mitochondrial genome given. 2-searches for all mitochondrial gene features and circularization. 3-stores the best result found. 4-uses the best assembly as backbone for a reference based assembly, using MIRA and MITObim, trying to extend the mitogenome and close gaps. 5-annotates the best assembly, identifying the start and end position of each and every feature. 6-creates a folder with all the results (PNG, GENBANK, FASTA, SEQUIN, CAF, MAF and a stats logfile). -
Error to trace to log to deploy. One click. No SSH.AppSignal links every error to the trace, the trace to the log, the log to the deploy that shipped it.
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ReorJS
Distributed Computing with JavaScript
Create your own distributed computer that can distributed javascript based applications to any computer with a web browser, headless browser or node.js installation. For more information and updates please see our website - http://reorjs.com. -
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walterbot
walterbot: Virtual presence device www controlled with a raspberrypy
walterbot è un "virtual presence device" controllabile da remoto via interfaccia web. La distro Debian per architettura ARMhf6 è stata ottimizzata per "Raspberrypi B rev2". Il codice python scritto da Walter, controlla 2 motori DC tramite un TB6612FNG https://github.com/InformaticiTarantini/Pi-dro La distro è "out of the box" basta clonare l'immagine su una SD card (minimo 2Gb) proprio come si fa con raspbian. -
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VirtualRoot
CPIB project aims to create a multiscale model of a plant root
The Centre for Plant Integrative Biology’s (University of Nottingham) core project aims to create a multiscale model of a plant root, based on the model higher plant Arabidopsis thaliana -
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Mishkal: Arabic Text Vocalization
Arabic Text Vocalization system
Automatic system of vocalization of arabic text. -
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Aelius Brazilian Portuguese POS-Tagger
Python, NLTK-based package for shallow parsing of Brazilian Portuguese
Aelius is an ongoing open source project aiming at developing a suite of Python, NLTK-based modules and interfaces to external freely available tools for shallow parsing of Brazilian Portuguese. It also includes language resources such as language models, sample texts, and gold standards. Presently, Aelius already offers facilities for POS-tagging and chunking corpora and outputting annotations in different formats, such as in XML in the TEI P5 encoding scheme. -
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Pathomx
Workflow-based data analysis built on IPython
Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis. -
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Latest on Arxiv
Parse the latest Arxiv RSS stream and get your institute preprints
Latest on Arxiv is a program/script with a simple job to do. Every day, it will download all pdf files from your favorite Arxiv RSS, and will then scan it to see if any authors from your favorite institute(s) are on there. If so, it will save the resulting index. The matched files are then parsed into a short list, featuring only the latest 4 preprints (which is ideal for a single TV screen in the coffee corner), and a long list which contains every paper in a clickable way. I provide... -
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slycat
Web-based data science analysis and visualization platform.
This is Slycat - a web-based data science analysis and visualization platform, created at Sandia National Laboratories. The goal of the Slycat project is to develop processes, tools and techniques to support data science, particularly analysis of large, high-dimensional data. -
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Advanced Numerical Instruments 2D
Advanced numerical instruments: adaptive meshing, FE methods, solvers
Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers. -
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Spatial Grammar Interpreter Applet: A 3D spatial grammar interpreter that provides for the interactive, visual development and application of three-dimensional parametric grammar rules.
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A project to host code developed for the Microtransat challenge, a race between autonomous sailing robots. This project is intended for both supporting code such as tracking systems and robot control systems or parts of robot control systems.
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SnowMicroPyn
Python based reader for SnowMicroPen® .pnt measurements
SnowMicroPyn is an opensource reader for SnowMicroPen® files in binary .pnt format. The reader is Python based and published as source code as well as compiled executable for Windows, Linux and Mac. The software is preliminary, thus please report bugs. For further information, please read the Readme.txt in the download section. The SnowMicroPen® (SMP) is developed by the WSL Institute for Snow and Avalanche Research, Davos. The SMP is the first high-resolution snow penetrometer. ... -
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That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
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MRA
A general recommender system with basic models and MRA
Multi-categorization Recommendation Adjusting (MRA) is to optimize the results of recommendation based on traditional(basic) recommendation models, through introducing objective category information and taking use of the feature that users always get the habits of preferring certain categories. Besides this, there are two advantages of this improved model: 1) it can be easily applied to any kind of existing recommendation models. -
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acp245
ACP245 Suite: Brazil Telematics protocol implementation
This "suite" includes a portable reference implementation and testing tools for ACP245, the automotive Telematics protocol defined by Brazil government. see: http://www.denatran.gov.br/simrav/simrav.asp -
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SocExplorer
SocExplorer, an open source System On Chip testing software/framework.
SocExplorer is an open source generic System On Chip testing software/framework. We write this software for the development and the validation of our instrument, the Low Frequency Receiver(LFR) for the Solar Orbiter mission. This instrument is based on an actel FPGA hosting a LEON3FT processor and some peripherals. To make it more collaborative, we use a plugin based system, the main executable is SocExplorer then all the functionality are provided by plugins. Like this everybody can provide his set of plugins to handle a new SOC or just a new peripheral. SocExplorer uses PythonQt to allow user to automate some tasks such as loading some plugins, configuring them and talking with his device. ...
