Showing 630 open source projects for "open source workflow software"

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  • 1
    A Python package with bindings to the "Virtual Instrument Software Architecture" VISA library, in order to control measurement devices and test equipment via GPIB, RS232, or USB. Note: Development of PyVisa moved to github https://github.com/hgrecco/pyvisa This page is of historical interest only!
    Downloads: 1 This Week
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  • 2

    Webapp

    A web interface to the SnowyOwl gene prediction pipeline

    Downloads: 0 This Week
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  • 3

    py-astro

    An astronomical library.

    Python package for calculation right ascension, declination, and distance for solar system planets.
    Downloads: 0 This Week
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  • 4
    Abandoned version of qbc. DOES NOT WORK properly
    Downloads: 0 This Week
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  • 5
    A collection of pure Python algorithms and data structures
    Downloads: 1 This Week
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  • 6

    nwbas2ecce

    nwbas2ecce converts nwchem basis set files to the ECCE format

    The basis sets included with ECCE have -- as far as I can tell -- not been updated for many years. In addition, many of the newer basis sets that come with nwchem aren't included, such as the def2- series. nwbas2ecce is a python script that aims to automate as much as possible of the conversion process of a nwchem basis set file into the files necessary for ECCE to included it in the basis set tool. The process isn't completely automatic, but I also believe that it shouldn't be to...
    Downloads: 0 This Week
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  • 7
    slumo

    slumo

    Software and Library for USB2AD device

    SLUMO is a software and library for USB2AD module. Project has two parts. The first is stand alone measurement software with GUI using GTK3+ and python 3. The second is a library that handle all comunication with device, so you can create your own scripts for custom measuring in a very easy way.
    Downloads: 0 This Week
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  • 8

    hrefinder

    Detection of homologous recombination events from SNP data

    This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of...
    Downloads: 0 This Week
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  • 9
    A simple python script for aquarists that figures tank volume, salinity, converts temp & volume, and calculates substrates based on their specific gravity.
    Downloads: 0 This Week
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  • 10
    sigrok
    The sigrok project aims at creating a portable, cross-platform, Free/Libre/Open-Source signal analysis software suite that supports various device types, such as logic analyzers, MSOs, oscilloscopes, multimeters, LCR meters, sound level meters, thermometers, anemometers, light meters, dataloggers, function generators, power supplies, GPIB interfaces, and more.
    Downloads: 1 This Week
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  • 11
    Black Spot Leaf Area Calculator

    Black Spot Leaf Area Calculator

    Automated leaf area estimation from scanned leaf images

    Black Spot is a free stand alone software and method to estimate leaf area from images of leaves captured using standard flatbed scanners. This easy to use software allows the user to batch process a large number of samples from multiple species with minimal user input.
    Downloads: 4 This Week
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  • 12

    CudlaBot

    Quadruped robot with simulator control software

    Downloads: 0 This Week
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  • 13

    Dvipdfm tool for SCons

    SCons tool to cooperate with dvipdfm program

    SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This is a SCons extension (tool) which enables usage of the dvipdfm program to convert dvi files to pdf.
    Downloads: 0 This Week
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  • 14

    Vendettool

    This allows to program a path for your vex robot in the simplest way !

    Ce projet a pour but de faciliter la programmation de parcours pour robots vex avec des encoders. Il suffit de placer des point sur l'image, de définir une échelle et d'indiquer la distant qui sépare les roues motrices et le programme va générer un code RobotC que vous pourrez utiliser pour programmer votre robot ! Et il y a évidement pleins d'outils indispensables pour vous rendre la tâche plus facile ;). https://www.youtube.com/watch?feature=player_embedded&v=4U9jdZDquII
    Downloads: 0 This Week
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  • 15
    PACS VM

    PACS VM

    ISO - Customized version of dcm4chee 2.17.3 for MySQL.

    1. Add JBoss Application Server 4.2.3.GA for JDK 6. 2. Cleanup for Windows and deprecated files. 3. Off CONSOLE records - http://forums.dcm4che.org/jiveforums/thread.jspa?messageID=4787
    Downloads: 0 This Week
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  • 16

    dAnalytics

    dAnalytics is a software made for education in discriminant analysis.

    dAnalytics is a software made for educational purposes to work with discriminant analysis. It's a very simple calculator over bi-dimensional populations. You input a file with two columns (one for each variable) and tryout different separations of populations (blue and red) and analyze it's efficiency by observing the eigen value result for the attempted separation. It also gives many information about the statistics both of the input and the separated populations. There's a documentation...
    Downloads: 0 This Week
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  • 17
    OpenRAVE
    Moved to https://github.com/rdiankov/openrave An open-source, cross-platform, plugin-based robot planning environment for autonomous robotics. Includes services like collision detection, physics, (inverse) kinematics, sensors, robot controls, python bindings, and a network scripting environment.
    Downloads: 3 This Week
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  • 18
    BRAHMS is a Modular Execution Framework for dynamical systems. It knits together independently-authored software modules implementing dynamical processes into an integrated system, and supervises the deployment and execution of that system.
    Downloads: 3 This Week
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  • 19
    IMPORTANT: The project moved over to github! You can find it at: https://github.com/exhuma/python-cluster
    Downloads: 0 This Week
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  • 20
    This ROS (Robot Operating System) repository contains the ROS packages for using ROS with the Webots mobile robot simulation software.
    Downloads: 0 This Week
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  • 21
    GEPETTO - Gene Prioritization in Java

    GEPETTO - Gene Prioritization in Java

    GEPETTO (GEne Prioritization ExTended TOol)

    GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein...
    Downloads: 1 This Week
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  • 22

    Ablator

    A tool for automating laser ablations for neuroscience

    Ablator is a suite of software that automates the microscopic detection of cell targets and also directs a 2-photon microscope to lesion these targets in arbitrary patterns for neuroscience research. See Hayes et al 2012 for an example of its usage (http://www.pnas.org/content/109/21/8286.abstract).
    Downloads: 0 This Week
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  • 23
    GIIAF Microscopy Library

    GIIAF Microscopy Library

    The GIIAF Microscopy Library, that uses customised OMERO software

    This project incorporates a suite of tools that aim to allow researchers within Griffith's Imaging and Image Analysis Facility (GIIAF) to efficiently and effectively provide secure, centralised, web-accessible data storage, management and manipulation. The open-source Java-based OMERO software was customised to provide most of the features of this project.
    Downloads: 1 This Week
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  • 24
    StabiTissue

    StabiTissue

    3D Stabilization software for intravital imaging of mouse organs

    - 2D Stabilization in each slice of the stacks in time. - 3D Stabilization intravital imaging of all the stacks (including the dimension Z) - create the videos and the stabilized images in a new folder
    Downloads: 0 This Week
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  • 25

    OpenSQUID

    Superconducting QUantum Interference Devices (SQUIDs) control software

    OpenSQUID is a Python framework for the control of SQUID (superconducting quantum interference device) readout electronics. It currently supports the Star Cryoelectronics PCI-1000 electronics with PFL-100 and PFL-102 flux-locked loops. Simultaneous operation of both PFL-100s and PFL-102s from a single PCI-1000 is supported. More features are under development. The software is implemented in Python and aims to be easily integrated with user-defined measurement and control code.
    Downloads: 1 This Week
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