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RefDB is a reference database and bibliography tool for SGML, XML, and LaTeX documents, sort of a Reference Manager or BibTeX for markup languages. It is portable and known to run on Linux, Free/NetBSD, OSX, Solaris, and Windows/Cygwin.
Online bibliographic manager for research groups. Zotero-compatible.
refbase is a web-based bibliographic manager which can import and export references in various formats (including BibTeX, Endnote, MODS XML, and OpenOffice). It can make formatted lists of citations and offers powerful searching, rich metadata, and RSS.
Distributed Generic Information Retrieval (DiGIR) - developing and testing a protocol for single point access to distributed data sources. Based on HTTP, XML, and UDDI.
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LBXR - LOAD BLAST XML RESULTS
O sistema permite que sejam importados resultados obtidos por meio de pesquisas de similaridade a partir do BLAST, com resultados gerado no formato XML para o banco de dados relacional MariaDB ou MySQL.
Mediboard is a web based open source system to manage Healthcare structures. The system is a based on a web multi-layers architecture to manage various interconnected modules, using PHP, XML, XHTML, Javascript, CSS, Smarty and PEAR.
iChair is a powerful submission/review server software designed to help the program chair of a conference with: submission collection, assignment of articles to reviewers, review collection, discussions, mailing to authors and reviewers...
Release 29 of iChair transitioned from SQLite2 to SQLite3 and can now run on PHP 5.4 and higher. Upgrading from a previous release of iChair will require you to delete all databases.
lib_data_io is a set of PHP libraries designed to easily move complex sets of data between PHP array data structures and a variety of sources and destinations including JSON, XML, ICAL, MySQL, HTML, Trac WIKI, text, LDIF, and plot images.
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Publist - HTML Publication list generator. Automates most of the chores involved in maintaining online academic publication lists and offers many presentation, filtering and sorting options to use in your web page. Can import & export BibTeX.
Exows extends the capabilities of the OWS (OGC Web Services). It enables the multilingualism functionalities for OWS (INSPIRE compliant) and allows complex features schemas for WFS and WMS getFeatureInfo (GML). It was developed by BRGM in OneGeology and was continued by BRGM in EUROGEOSS.
Expire permet de saisir et d'exporter une fiche de métadonnées selon la norme ISO 19139, ISO19115 et ISO19110 conformément à la directive européenne INSPIRE. L'application génère un XML que l'on peut ensuite importer directement dans GeoSou
GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features
The GPDE is a biological protein database based on the PRIDE xml format. It combines proteomics experiments based on the investigated cell type and creates a biological meta-analysis. Try it out at http://www.meduniwien.ac.at/proteomics/database.
MooGraph is an utility to produce interactive dynamical graphs from statistical data. Deliberately inspired to GapMinder, it represents the evolution of multivariate data in time by means of coloured bubbles of variable sizes on an (x,y) plot.
Earnest is a A PHP-MYSQL AI EXPERT SYSTEM for creating powerful expert system easily. Its simple PHP API can also be called from JAVA, browsers or other software to perform GIS and other comparisons. Also has ability to create XML results.
A repository linking to eight Bioinformatics Resource Centers (BRCs) sponsored by the NIAID. The BRCs are providing web-based resources to scientific community conducting basic and applied research on organisms considered potential agents of bioterrorism
Questionnaire currently is a PHP API for the creation of web based data entry. XML file forms with question and database descriptions are used to generate forms. Answers are stored stored in an Access or MySQL database.
The NCD Toolkit is a PHP application to collaboratively manage biological collection metadata that corresponds to the TDWG TDWG Natural Collection Description (NCD v0.8) format. The project was initially funded by GBIF.
A PHP webapp to upload taxonomic checklists as Excel or CSV files to be served as TDWG TCS XML/RDF. It can handle multiple checklists, has a Tapir light webservice and a taxonomic tree of species names created from taxonomy in a checklist can be browsed.
PHP based Web Map Service (WMS) and WFS implementation according to OGC's specification. Data are stored according to Simple Features Specification in WKT format and delivered (among others) in SVG, PDF, Flash, PNG, and GIF format.
A User Interface implementation of a "CO2/Carbon Calculator" and profiling application to help accelerate action on Climate Change. This client interface is an example of front-end access to the AMEE API. It provides examples of registration, calculati
Indivo is a distributed, web-based, personally controlled health record system that is accessible to the nomadic user and built to public standards. The Indivo project includes a pluggable web services API, web-based UI, data subscription framework, etc.