Showing 53 open source projects for "web, java"

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  • 1
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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    Downloads: 19 This Week
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  • 2
    Krishnamurti's Book of Life D.Thoughts

    Krishnamurti's Book of Life D.Thoughts

    Jiddu Krishnamurti's Book of Life|Libro de la Vida

    FREE distribution of the JAVA-XML multiplatform e-book about Jiddu Krishnamurti's Book of Life (a witty daily cookie-like reflection). Ahora, lea diariamente los pensamientos de Krishnamurti en castellano- Obtenga una agenda gratis.
    Downloads: 1 This Week
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  • 3
    Systems Biology Markup Language (SBML)

    Systems Biology Markup Language (SBML)

    A file format for exchanging computational models in systems biology

    The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
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    Downloads: 31 This Week
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  • 4
    This is software to create web dictionaries, esp. for Esperanto like Reta Vortaro (http://reta-vortaro.de). A dictionary is made from articles written in a special XML dialect by transformations using XSLT, ant and some Java code.
    Downloads: 0 This Week
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  • 5
    Software, information, data sets and documentation for the Web as Corpus community.
    Downloads: 0 This Week
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  • 6
    Bridge Designer and Contest

    Bridge Designer and Contest

    A national virtual bridge engineering contest for kids of all ages.

    Bridge Designer has been replaced with the web app ASCE Bridge Designer, Cloud Edition. Binaries posted here will go away on 1 July 2026. The source repo will remain. A national virtual bridge engineering contest with prizes for middle and high school kids, grades 6 to 12, but anyone can enter for fun. Based on the award-wining Bridge Designer client software, now open source through this project. Web site infrastructure supports worldwide participation in qualifying and semifinal rounds...
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    Downloads: 2,468 This Week
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  • 7
    Accent Tool Suite

    Accent Tool Suite

    Accent interfaces and controls systems through goals and policies

    Accent (Advanced Component Control Enhancing Network Technologies) is a comprehensive tool suite that interfaces a variety of communications systems and allows these systems to be controlled through goals (high-level user aims) and policies (lower-level system rules). Accent has been applied to the domains of: o Call Control: for telecommunications, particularly call control in Internet telephony o Home Care: for home automation and telecare, particularly for domestic appliances...
    Downloads: 0 This Week
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  • 8
    Generic Model Organism Database Project
    GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.
    Downloads: 2 This Week
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  • 9
    Collaborative infrastructure for Collaborative Product Development (manufacturing) within Extended and Virtual Enterprise.
    Downloads: 0 This Week
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  • 10
    CARE2X - Integrated Hospital Info System
    Integrated Hospital Information System. PHP,mySQL,PostgreSQL. Surgery, Nursing,Outpatient,Wards,Labs, Pharmacy, Security,Admission,Schedulers, Repair, Communication & more. Multilanguage, WYSIWYG forms, userconfig, embedded workbots. Modular & scalab
    Downloads: 71 This Week
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  • 11

    openSEQ

    NGS compute distro proloaded with pipeline analysis software

    ...Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk
    Downloads: 0 This Week
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  • 12
    Full featured free PACS based on dcm4chee and mysql, with remote web accession available for Linux in Debian packaging format for x86 32 and 64 bit processors. (KEYWORDS: PACS,DICOM,HL7,WORK LIST)
    Downloads: 7 This Week
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  • 13
    TreeBASE is a database and web front end that stores phylogenetic trees and the data matrices used to generate them. The current iteration comprises a complete rewrite of the schema and web layer, and will include a web services layer.
    Downloads: 0 This Week
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  • 14
    Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no
    Downloads: 0 This Week
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  • 15
    This project aims the requirement of managed informations / documents in the treatment of patients, i.e. integrated care. The underlaying data model implements standards of electronic health recording, the project is based on a SQL db and Java EE framework. This is currently a student driven project for educational purposes.
    Downloads: 0 This Week
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  • 16

    ssSearchEngine

    keyword search engine for semi-structured data (Tables, lists,...)

    This application implement an approach for doing keyword based search over semi-structured data available in HTML pages.
    Downloads: 0 This Week
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  • 17
    Soaplab is a generator of Web Services providing a programmatic access to command-line (and other) applications on remote computers (an example of its usage is available at http://www.ebi.ac.uk/soaplab/)
    Downloads: 0 This Week
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  • 18
    GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features
    Downloads: 7 This Week
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  • 19
    CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
    Downloads: 2 This Week
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  • 20
    Biodiversity Information Group develops software tools and data standards that enable herbaria and museums to create dynamic distributed queries of their online databases. See http://bit.ly/bfirSh and http://bit.ly/bwpnSY for latest developments.
    Downloads: 0 This Week
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  • 21
    DEPRECATED PROJECT! SolexaTools is becoming the SeqWare project (http://seqware.sourceforge.net) to better reflect its expanded sequencer support. Please go to this project page for code and documentation.
    Downloads: 0 This Week
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  • 22
    The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.
    Downloads: 0 This Week
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  • 23
    Project moved to https://github.com/ivandeex/optikus
    Downloads: 0 This Week
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  • 24
    The Flow Cytometry Laboratory Information Management System (FlowLIMS) is a web-based software system that gives users the ability to create and manage experiment protocols for the DiVa and FACScan flow cytometers
    Downloads: 0 This Week
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  • 25
    Submission tool for Microarray experiments
    Downloads: 0 This Week
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