Search Results for "evolution linux"

Created by Julie Shay and Claudio Slamovits. Introminer reads a sequence file with genomic data that contains sequence and intron positions in genbank format. It extracts positional and sequence data as well as the intronic sequences and other important parameters to study gene architecture and intron evolution at a genome-wide scale.

SimBac is a software package for simulating bacterial genome evolution. It outputs samples of DNA sequences at each generation & allows testing of major evolutionary mechanisms, including mutation, recombination, genetic drift, and natural selection.

Gene regulation is an important current matter of research. TFBS predictions will help understanding it. A problem with common tools are many putative false positives and a lack of visualizing TFBS evolution. This tool aims to solve these problems.

Slime Simulator is an artificial life sim written in Perl which will mimic several properties of cell-based life, including inheritance, mutation and evolution, osmosis, movement and competition for resources.

In silico evolution of biochemical networks using a genetic algorithm combined with a rule-based biochemical network model.